Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0094 |
Symbol | |
ID | 4440501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 106639 |
End bp | 107346 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639671955 |
Product | Zn-dependent protease |
Protein accession | YP_813944 |
Protein GI | 116628772 |
COG category | [R] General function prediction only |
COG ID | [COG2738] Predicted Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.00198706 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACTATA TGCCATTTTT CTATGACCCA TATTTTTGGA TGATTATTTT AGGTGTAGCA ATTTCTGGCT GGGCCTCAAT GAACGTTAAT TCGACTTTTA ATCGCTATGA TCAAATTCAA AATCAAGGTA ATTACACTGG TAAAGTAGCC GCTCGTTACA TTCTAGACCA AGCTGGTTTA TATGAAGTTG AAATTCGCGA AGTTGCCGGG AACTTAACTG ATAATTACAA TCCTACTAAT AAAGTTCTCA GCCTTTCGCA GTCTGTTTAT AACTCTTCTT CTATTGCTGC GGTTGGTGTA GCAGCACATG AAGTCGGACA TGCCTTACAA GATGCTAGCA ACTATGCACC AATGCGTATG CGTTCTGCCT TAGTGCCAAT TGTTTCTCTT GGTTCTAATT TATCAATGCC ATTAATTCTT CTAGGACTAG TCTTAGGGAT GAATCAAACC TTGATTAAAA TTGGTATTTG GTGCTTTGCA CTAGTCCTTC TTTTTCAGGT AGTAACTTTA CCAGTTGAAT TTAATGCTTC ACATCGTGCG CTAAGGATGT TAAATAATGG GGCTATTTTA TCGCCACAAG AGATGCCAAT GGCACGCAAA GTGTTGTTTG CGGCAGCCTT AACCTATGTC GCAGCAGTTT TAACAAGCAT GCTACAATTA TTTAGACTTC TTCTTATTTT TGGAGGACAT AACGACGATA ATAACTGA
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Protein sequence | MYYMPFFYDP YFWMIILGVA ISGWASMNVN STFNRYDQIQ NQGNYTGKVA ARYILDQAGL YEVEIREVAG NLTDNYNPTN KVLSLSQSVY NSSSIAAVGV AAHEVGHALQ DASNYAPMRM RSALVPIVSL GSNLSMPLIL LGLVLGMNQT LIKIGIWCFA LVLLFQVVTL PVEFNASHRA LRMLNNGAIL SPQEMPMARK VLFAAALTYV AAVLTSMLQL FRLLLIFGGH NDDNN
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