Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0088 |
Symbol | |
ID | 4440495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 101960 |
End bp | 102358 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639671949 |
Product | hypothetical protein |
Protein accession | YP_813938 |
Protein GI | 116628766 |
COG category | [S] Function unknown |
COG ID | [COG3189] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.0412988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGTAA ATATAAATTG TAGGGGGAAT CAAAAGATGA ATGAAATAAA AGTTGTTAGA ATTTATGACC ATGAGCAACC CGCAGGTTAT AGAATCTTAG TAGATCGCTT ATGGCCTCGA GGAATGAGCA AGGTAAAAGC TCATTTAGAT GAATGGGATA AGGAAATTGG GCCAACTAAT GAATTAAGAA AATGGTTTAA TCATGAAGAT GACAAGTTTC CTGAATTCAA GACTAAGTAT ATAGCGCAAT TGAAAGCTAA TCCAGTTACA ACCGAGTTTG TTAAAAATGT AAAAGAAAAG CTAGCTCAAG AAGACGTTAT CTTCTTATAT GGTGCTAAAA ATAAAAAGCA CAACCAGGCA GTTGTGCTTA AAGATTTTAT TGATAGTCAA TTAGGTTAA
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Protein sequence | MKVNINCRGN QKMNEIKVVR IYDHEQPAGY RILVDRLWPR GMSKVKAHLD EWDKEIGPTN ELRKWFNHED DKFPEFKTKY IAQLKANPVT TEFVKNVKEK LAQEDVIFLY GAKNKKHNQA VVLKDFIDSQ LG
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