Gene LGAS_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0088 
Symbol 
ID4440495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp101960 
End bp102358 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content33% 
IMG OID639671949 
Producthypothetical protein 
Protein accessionYP_813938 
Protein GI116628766 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.0412988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGTAA ATATAAATTG TAGGGGGAAT CAAAAGATGA ATGAAATAAA AGTTGTTAGA 
ATTTATGACC ATGAGCAACC CGCAGGTTAT AGAATCTTAG TAGATCGCTT ATGGCCTCGA
GGAATGAGCA AGGTAAAAGC TCATTTAGAT GAATGGGATA AGGAAATTGG GCCAACTAAT
GAATTAAGAA AATGGTTTAA TCATGAAGAT GACAAGTTTC CTGAATTCAA GACTAAGTAT
ATAGCGCAAT TGAAAGCTAA TCCAGTTACA ACCGAGTTTG TTAAAAATGT AAAAGAAAAG
CTAGCTCAAG AAGACGTTAT CTTCTTATAT GGTGCTAAAA ATAAAAAGCA CAACCAGGCA
GTTGTGCTTA AAGATTTTAT TGATAGTCAA TTAGGTTAA
 
Protein sequence
MKVNINCRGN QKMNEIKVVR IYDHEQPAGY RILVDRLWPR GMSKVKAHLD EWDKEIGPTN 
ELRKWFNHED DKFPEFKTKY IAQLKANPVT TEFVKNVKEK LAQEDVIFLY GAKNKKHNQA
VVLKDFIDSQ LG