Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0078 |
Symbol | |
ID | 4440434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 92638 |
End bp | 93048 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639671939 |
Product | hypothetical protein |
Protein accession | YP_813928 |
Protein GI | 116628756 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000134929 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGATT CCAAGAATCT TGAATTAAAA ATTAAAGATA GTGCTAAAGA AGTTTTAGAA AAGAAAATTA AGCCAGGACA AGTCGTTTTG CTGGCTTTAA ATGATGGTTC AAATGGCTAT TCTAAATTAG GTGGAACTTG TACAATCGGT GCTAATTTTC AACTAGTGTT GCTAGATCAT AAGGATCCAG AATTTTCAAT TAAGGTTAAC AACAACATGG GTTTAGATAT GTATACATCT GATAAAGAAT TAGCCTTTTT AGACGATGGT TTAGTTCTTA ATGCTCGTAA TGCTACTCTA TCCTTATCTT CTAATGAAGG AATCATCGAT GGCGGAGTTA CTATTTCTGA ATTCAAAGGA GAAAAACTTT CTGCTGATGA GATGAAAAAA TTAGGTGGAA AGATCTGCTA G
|
Protein sequence | MVDSKNLELK IKDSAKEVLE KKIKPGQVVL LALNDGSNGY SKLGGTCTIG ANFQLVLLDH KDPEFSIKVN NNMGLDMYTS DKELAFLDDG LVLNARNATL SLSSNEGIID GGVTISEFKG EKLSADEMKK LGGKIC
|
| |