Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0075 |
Symbol | |
ID | 4440431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 89782 |
End bp | 90672 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639671936 |
Product | heat shock protein HtpX |
Protein accession | YP_813925 |
Protein GI | 116628753 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTATC AACAAATAGC ACGCAATAAG CGTAAAACAG CATTTTTGCT TGTTATATTC GTTATTATTC TAGCTCTTGT TGGTGGTGGG TTAGGATATT TGATTAACGG TGAACCGCTA TCAGGAATTG TAATTGCCCT AATCGGTAGC TTAATTTATC TTTTTATTGT TCTTCAAAAT CCGGGAAATT TAGTCATGAG CATGAATCAT GGCCGAGAGA TTCATGAAGA AGATGATCCA GAATTGTGGC ATATTGTAGA AGATATGGCA CTTGCGGGAC AGGTTCCAAT GCCAAGAGTC TTTATTATCA ACGATGAAAG TCCTAATGCC TTTGCAACTG GGCGCGATCC TAAGCACAGT TTCGTAGCTG TTACTACTGG ATTAAGAAAG CGACTTAATC GAAGTGAATT AGAGGGTGTT CTTGGCCATG AAATTTCTCA TATTCGAAAT TATGACATTT TAGTATCTAC AATTGGAGTA GCTTTAGCTG CTGTAATTTC ATTTATCTCT AGTTTTGCGT CCCGTATTTG GTGGTGGGGC GGCAATTCTG ACCGTGATGA CGATGACTCT AGCTCTCTAG AAACAATTTT TAAAATAGTG GCCATTGTTT TCACATTAAT TTTAGGACCT CTTGCTGCTG CACTAGCTCA GATGGCTCTC TCACGTAATC GTGAATATTT AGCTGATGCT AGTTCAGTTG AGCTTACTAG AAACCCTCAA GGGTTAATTT CAGCTTTAGA AAAGATTTCA AATAGCGAGC CAATGAAAGA TCCAGATCCG TCAAGCGCTG GTTTATACAT CGAAAATCCG TTTCATAAGC GTGGCTTGAG CTCATTATTT GATACTCATC CGCCTACAGC AGACAGAATT AAGAGATTGG AAAACATGTA A
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Protein sequence | MLYQQIARNK RKTAFLLVIF VIILALVGGG LGYLINGEPL SGIVIALIGS LIYLFIVLQN PGNLVMSMNH GREIHEEDDP ELWHIVEDMA LAGQVPMPRV FIINDESPNA FATGRDPKHS FVAVTTGLRK RLNRSELEGV LGHEISHIRN YDILVSTIGV ALAAVISFIS SFASRIWWWG GNSDRDDDDS SSLETIFKIV AIVFTLILGP LAAALAQMAL SRNREYLADA SSVELTRNPQ GLISALEKIS NSEPMKDPDP SSAGLYIENP FHKRGLSSLF DTHPPTADRI KRLENM
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