Gene LGAS_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0075 
Symbol 
ID4440431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp89782 
End bp90672 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content39% 
IMG OID639671936 
Productheat shock protein HtpX 
Protein accessionYP_813925 
Protein GI116628753 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTATC AACAAATAGC ACGCAATAAG CGTAAAACAG CATTTTTGCT TGTTATATTC 
GTTATTATTC TAGCTCTTGT TGGTGGTGGG TTAGGATATT TGATTAACGG TGAACCGCTA
TCAGGAATTG TAATTGCCCT AATCGGTAGC TTAATTTATC TTTTTATTGT TCTTCAAAAT
CCGGGAAATT TAGTCATGAG CATGAATCAT GGCCGAGAGA TTCATGAAGA AGATGATCCA
GAATTGTGGC ATATTGTAGA AGATATGGCA CTTGCGGGAC AGGTTCCAAT GCCAAGAGTC
TTTATTATCA ACGATGAAAG TCCTAATGCC TTTGCAACTG GGCGCGATCC TAAGCACAGT
TTCGTAGCTG TTACTACTGG ATTAAGAAAG CGACTTAATC GAAGTGAATT AGAGGGTGTT
CTTGGCCATG AAATTTCTCA TATTCGAAAT TATGACATTT TAGTATCTAC AATTGGAGTA
GCTTTAGCTG CTGTAATTTC ATTTATCTCT AGTTTTGCGT CCCGTATTTG GTGGTGGGGC
GGCAATTCTG ACCGTGATGA CGATGACTCT AGCTCTCTAG AAACAATTTT TAAAATAGTG
GCCATTGTTT TCACATTAAT TTTAGGACCT CTTGCTGCTG CACTAGCTCA GATGGCTCTC
TCACGTAATC GTGAATATTT AGCTGATGCT AGTTCAGTTG AGCTTACTAG AAACCCTCAA
GGGTTAATTT CAGCTTTAGA AAAGATTTCA AATAGCGAGC CAATGAAAGA TCCAGATCCG
TCAAGCGCTG GTTTATACAT CGAAAATCCG TTTCATAAGC GTGGCTTGAG CTCATTATTT
GATACTCATC CGCCTACAGC AGACAGAATT AAGAGATTGG AAAACATGTA A
 
Protein sequence
MLYQQIARNK RKTAFLLVIF VIILALVGGG LGYLINGEPL SGIVIALIGS LIYLFIVLQN 
PGNLVMSMNH GREIHEEDDP ELWHIVEDMA LAGQVPMPRV FIINDESPNA FATGRDPKHS
FVAVTTGLRK RLNRSELEGV LGHEISHIRN YDILVSTIGV ALAAVISFIS SFASRIWWWG
GNSDRDDDDS SSLETIFKIV AIVFTLILGP LAAALAQMAL SRNREYLADA SSVELTRNPQ
GLISALEKIS NSEPMKDPDP SSAGLYIENP FHKRGLSSLF DTHPPTADRI KRLENM