| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0070 |
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| Symbol | |
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| ID | 4440426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 85539 |
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| End bp | 86018 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639671931 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_813920 |
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| Protein GI | 116628748 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000017339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATCA AAATTGTTTG TGTAGGTAAA CTAAAAGAAA AGTATTTTAA GGATGGTATT
GCTGAATACG TAAAGAGAAT GGGGCGTTTT GCTAAAGTAA AAATAATTCA AGTACCAGAC
GAAAAAGCCC CCGAAAAGCT AAGTCCTGCT GAAATGGAGC AGGTCAAAGA AATCGAGGGA
AAAAGAATTC TAGATAAGAT AAAAGATAAA GAATATGTTT ATGTAACGGC AATTAAGGGT
AAAGAAAGAA CTAGCGAAGA CTTTGCTAAA GAGCTAGCTG ACTTAACTAC TTATGGACAT
TCAGACATTA CCTTTGTGAT TGGAGGAAGT TTAGGAACAA GTAATGCAGT AAACAAACGA
GCTGATGATC TAATTAGTTT TGGTAAATTT ACAATGCCGC ACCAATTAAT GCGGTTAGTT
TTAGTTGAAC AAATTTACCG TGCCTTTATG ATTAATAGCG GTAGTCCGTA TCATAAATAA
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| Protein sequence | MNIKIVCVGK LKEKYFKDGI AEYVKRMGRF AKVKIIQVPD EKAPEKLSPA EMEQVKEIEG
KRILDKIKDK EYVYVTAIKG KERTSEDFAK ELADLTTYGH SDITFVIGGS LGTSNAVNKR
ADDLISFGKF TMPHQLMRLV LVEQIYRAFM INSGSPYHK
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