Gene LGAS_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0068 
Symbol 
ID4440457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp82921 
End bp83718 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content36% 
IMG OID639671929 
Productbeta-lactamase superfamily hydrolase 
Protein accessionYP_813918 
Protein GI116628746 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGTAT CGGTTTTATC AAGTGGTTCA ACAGGTAATT CTACATTGAT TGAGACTCCG 
CAGCATAAAA TCTTAATGGA TGCAGGTTTA TCTGGAAAGA AAACTAAGGA ATTACTAGCA
CAGGTAGGCG TTGATATTAA AGATATTGAT ATGGTATTTA TTAGCCACGA TCATACTGAC
CATTCTGGTG GATTAGGCGT ATTGATGAGA AGATATCCTA AAATTTCAGC CTATGCGAAT
TCAGGTACTT GGAATTATTT AATTGAAAGC AATAAGATCG GTAAATTACC TGTTGAACAA
ATTAATACGT TTGAGTCTGG TATAACTAAG ACTTTTGGTG ATTTGGACGT GACAAGTTTT
GCGACGAGTC ATGATGCGGC GCAGCCACAA TATTATGTCT TTACAAGTGG TGGTAAAAGA
TTTGCGTGTT TAACAGATAC TGGTTATGTT TCAAGTACTG TTAAAGGTGA AATAAGGGAT
GCAGATGGCT ATTTAATGGA ATTTAACTAT GACGATATGA TGCTTAGAAA TGGCCCTTAT
TCTTGGGCTT TGAAACATCG AATTATGTCT GATGTTGGAC ATCTTTCAAA TGATCAAGCG
GCAGATACCT TACTTGATGT AGTTTCTCCC AAAACTAAAC ATATTTTTTT AGCGCATCGC
AGCCAGCATA ATAATACTCA GTATTTAGCG CATGAAACGG CTGAAGACTT ATTGGTAGCT
GGGGATGCAA ATTTACCAGC TGATGTTAAA ATTATTGATA CCAATCCAAT GCAAGCTGGT
TCTTTAACGA AAATATAA
 
Protein sequence
MKVSVLSSGS TGNSTLIETP QHKILMDAGL SGKKTKELLA QVGVDIKDID MVFISHDHTD 
HSGGLGVLMR RYPKISAYAN SGTWNYLIES NKIGKLPVEQ INTFESGITK TFGDLDVTSF
ATSHDAAQPQ YYVFTSGGKR FACLTDTGYV SSTVKGEIRD ADGYLMEFNY DDMMLRNGPY
SWALKHRIMS DVGHLSNDQA ADTLLDVVSP KTKHIFLAHR SQHNNTQYLA HETAEDLLVA
GDANLPADVK IIDTNPMQAG SLTKI