Gene LGAS_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0067 
Symbol 
ID4440456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp82093 
End bp82914 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content33% 
IMG OID639671928 
Producthypothetical protein 
Protein accessionYP_813917 
Protein GI116628745 
COG category[S] Function unknown 
COG ID[COG4853] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.206847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTA AGAGAATTGA ATGGATTTTT TTAGTCGTAT TTATTGGAAT TAATATCTTT 
TTGGGTATTG AGCTTTGGCA AACACCGACG CTTTTATCTG CTGGCTCTAC TCCAATTCAA
ACTGATATTA AAAGCGAAAC GAGTGCAGAT CAGATAACTA TCCCTAAAGT TGATGATAAG
CAAGATGATG GGTATTATTT AGCTACCAAA GTGGACAATT CTTGGACAAA AAAAGCAGCA
GCACAGGTAA ATCAACAAGT AGAAACTAAT ACAACTGAAA ATAGTATTTC AGTTAATTTG
AACAAACCAA TTACTCTGTC GAAAGATTCC AAAAAAGCCC TGAAAGAAAT TATTCACTTT
AAAAATAATA GTCAAAACGT GTATGAGGGT AAAGATTATG TCTATCTTTC AGAATTATCC
GAGGGAGATG ATTATGTCTT TAATCAGAAA ACAAAGTATG GAGAAGTTTT TGCAGCAACT
GCTCGATTGC ACATTATTGT TAAAAATAAT CAAATTGTAT CGTATTCGCA ACGCTACGTT
AGCAATTTGA ATCCAGTACG TGAAAGACAA AATACAATTA GTTCAAAGGC TGCTGTAAAT
TCTTTATACA CTTATAGTGA ATTGCCAAAT AATTCTAAGA TTATCTGGTT AAAGCAAGTT
TATACTAAAT TGATCACTGT TCGAGGGAGC GAAATTTATA TTCCTACATG GGTAGCTGCG
ATTGAAAACA ATAATTCTCA TACGATGACC CTTAAGCGCG TAAACGCATT TACAGGGACA
ATTATCCAAA ATAATATTGC TGCTGATGAT TCAAAGGAGT AG
 
Protein sequence
MDFKRIEWIF LVVFIGINIF LGIELWQTPT LLSAGSTPIQ TDIKSETSAD QITIPKVDDK 
QDDGYYLATK VDNSWTKKAA AQVNQQVETN TTENSISVNL NKPITLSKDS KKALKEIIHF
KNNSQNVYEG KDYVYLSELS EGDDYVFNQK TKYGEVFAAT ARLHIIVKNN QIVSYSQRYV
SNLNPVRERQ NTISSKAAVN SLYTYSELPN NSKIIWLKQV YTKLITVRGS EIYIPTWVAA
IENNNSHTMT LKRVNAFTGT IIQNNIAADD SKE