Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0067 |
Symbol | |
ID | 4440456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 82093 |
End bp | 82914 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639671928 |
Product | hypothetical protein |
Protein accession | YP_813917 |
Protein GI | 116628745 |
COG category | [S] Function unknown |
COG ID | [COG4853] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.206847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTTA AGAGAATTGA ATGGATTTTT TTAGTCGTAT TTATTGGAAT TAATATCTTT TTGGGTATTG AGCTTTGGCA AACACCGACG CTTTTATCTG CTGGCTCTAC TCCAATTCAA ACTGATATTA AAAGCGAAAC GAGTGCAGAT CAGATAACTA TCCCTAAAGT TGATGATAAG CAAGATGATG GGTATTATTT AGCTACCAAA GTGGACAATT CTTGGACAAA AAAAGCAGCA GCACAGGTAA ATCAACAAGT AGAAACTAAT ACAACTGAAA ATAGTATTTC AGTTAATTTG AACAAACCAA TTACTCTGTC GAAAGATTCC AAAAAAGCCC TGAAAGAAAT TATTCACTTT AAAAATAATA GTCAAAACGT GTATGAGGGT AAAGATTATG TCTATCTTTC AGAATTATCC GAGGGAGATG ATTATGTCTT TAATCAGAAA ACAAAGTATG GAGAAGTTTT TGCAGCAACT GCTCGATTGC ACATTATTGT TAAAAATAAT CAAATTGTAT CGTATTCGCA ACGCTACGTT AGCAATTTGA ATCCAGTACG TGAAAGACAA AATACAATTA GTTCAAAGGC TGCTGTAAAT TCTTTATACA CTTATAGTGA ATTGCCAAAT AATTCTAAGA TTATCTGGTT AAAGCAAGTT TATACTAAAT TGATCACTGT TCGAGGGAGC GAAATTTATA TTCCTACATG GGTAGCTGCG ATTGAAAACA ATAATTCTCA TACGATGACC CTTAAGCGCG TAAACGCATT TACAGGGACA ATTATCCAAA ATAATATTGC TGCTGATGAT TCAAAGGAGT AG
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Protein sequence | MDFKRIEWIF LVVFIGINIF LGIELWQTPT LLSAGSTPIQ TDIKSETSAD QITIPKVDDK QDDGYYLATK VDNSWTKKAA AQVNQQVETN TTENSISVNL NKPITLSKDS KKALKEIIHF KNNSQNVYEG KDYVYLSELS EGDDYVFNQK TKYGEVFAAT ARLHIIVKNN QIVSYSQRYV SNLNPVRERQ NTISSKAAVN SLYTYSELPN NSKIIWLKQV YTKLITVRGS EIYIPTWVAA IENNNSHTMT LKRVNAFTGT IIQNNIAADD SKE
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