Gene LGAS_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0054 
Symbol 
ID4440476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp69430 
End bp70380 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content37% 
IMG OID639671916 
Productconjugated bile salt hydrolase-like protein 
Protein accessionYP_813907 
Protein GI116628735 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3049] Penicillin V acylase and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTACTG GTTTAAGATT TACAGATGAT CAAGGAAATC TCTACTTTGG ACGTAACTTA 
GATGTTGGAC AAGATTATGG TGAAGGTGTA ATTATCACAC CACGCAACTA TCCTCTTCCA
TATAAGTTTT TAGATAATAC GACTACTAAA AAAGCCGTTA TCGGTATGGG AATTGTAGTT
GATGGCTATC CTTCTTACTT TGACTGTTTC AATGAAGATG GTTTAGGAAT TGCTGGTCTA
AACTTCCCAC ATTTTGCCAA ATTTAGCGAT GGACCAATTG ATGGAAAAAT CAATTTAGCT
TCTTACGAAA TTATGCTCTG GGTTACTCAA AACTTCACTA AAGTTAGCGA TGTGAAAGAA
GCTTTAAAGA ACGTTAACTT AGTTAATGAA GCTATTAATT CATCATTTGC AGTTGCTCCT
CTTCACTGGA TTATTAGTGA CAAGGATGAA GCTATCATTG TTGAAGTTTC AAAGCAATAC
GGAATGAAAG TCTTTGATGA TAAGCTTGGC GTTTTAACTA ACAGTCCAGA CTTTAACTGG
CATCTTACTA ACCTTGGCAA CTATACTGGT TTAGATCCAC ATGATGCTAC AGCTCAAAGC
TGGAACGGTC AAAAAGTTGC TCCATGGGGC GTTGGCACTG GCAGCTTAGG TTTACCAGGT
GATAGCATTC CAGCAGATCG CTTTGTTAAA GCAGCTTACT TAAATGTTAA TTACCCAACT
GTTAAGGGTG AAAAAGCTAA CGTGGCTAAG TTCTTTAACA TCTTAAAGTC TGTTGCGATG
ATTAAGGGTA GCGTAGTTAA CAAACTGGGT AGCGATGAAT ACACTGTCTA CACCGCTTGC
TACTCTGCTG CTACTAAGAC TTATTACTGC AACTTTGAAA ATGATTTTGA ATTAAAGACT
TATAAGTTAG ACGATGAAAC GATGAACGCT GACAAGCTAA TCACCTATTA A
 
Protein sequence
MCTGLRFTDD QGNLYFGRNL DVGQDYGEGV IITPRNYPLP YKFLDNTTTK KAVIGMGIVV 
DGYPSYFDCF NEDGLGIAGL NFPHFAKFSD GPIDGKINLA SYEIMLWVTQ NFTKVSDVKE
ALKNVNLVNE AINSSFAVAP LHWIISDKDE AIIVEVSKQY GMKVFDDKLG VLTNSPDFNW
HLTNLGNYTG LDPHDATAQS WNGQKVAPWG VGTGSLGLPG DSIPADRFVK AAYLNVNYPT
VKGEKANVAK FFNILKSVAM IKGSVVNKLG SDEYTVYTAC YSAATKTYYC NFENDFELKT
YKLDDETMNA DKLITY