| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0044 |
|---|
| Symbol | |
|---|
| ID | 4440466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 43603 |
|---|
| End bp | 46224 |
|---|
| Gene Length | 2622 bp |
|---|
| Protein Length | 873 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639671906 |
|---|
| Product | adhesion exoprotein |
|---|
| Protein accession | YP_813897 |
|---|
| Protein GI | 116628725 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 115 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTG TTGTGAAATA TATAGATTTA GATAATAATT CAGCTGAGCT GGCAAGTTCA
GAAACGTTAA ATGGAAAAGT GGGAGAAAGA GTTAACTATC ATACAGCCGA AGAAGTCCAA
AAGCTAATAG CTGCTGGTTA TGTATTAGTT AATAATCCGT TTGATCTGAA TAATGAAGTA
CATTTTTTTA ATGAAACTTC TCAAGAATAC AAGCTCACTT TTAAACATGC TCAAGAAGAA
GTGACTGCTA AGAATTTAAA ATACGATTGT CAATTAGGGG ATGTGCAACT TAAAGGAAAG
CAAGTAGTCC ATTATACGGG TCTTGAAAAA AATATTGCTG ACAATATAGT TGAGGTTACT
TTTAATAGAA AAATTATCTA CGACAAAGTT ACTAAGCAGA AAGTGTCACT AAGCGCCTGG
CAGCCAGAAA AGTATTATTT GCCGTTAATT GCTACACCTG CTGTTTTAGA TTATACGCCT
GATAAAACGG TAATTGGCGG AGAAGCTGTT ACAGTTCAAA AGCCTAAGCA TGAGTACGTC
GTTACTTATT TGCCTAATAA GAAAAATGCT AGAAGGCAGA AAGCTGAAAT CAAGTTTATT
GATGTTGATA ACAATAATCA AGAATTAGCT AGCTCTGGCG AATTAAAAGG TAAGCCCGGC
AAAGAAATTT CTTACAGTAC GACAGAAACT TTAAAAGAAC TGTCAGATAA AGGATATGAA
GTCATTAATA ATGACTTTGA TTCTAAGGAC CAAAAGCCTG TCTTTGGAAA TAGCAGAGAT
TACATTCAAA CCTTTATTAT TGCCTTAAGA CATAAAAAAC AAGCCGTTAA TTCTGATCAT
CCTTCTTCAG AAATTGATCA TCGTCTTTAT GAAAAAGAAG TACATCGAAA AATTACTTTT
TCAGGTTTAA GCGGTCAAAA ATTAGATGAT ATAGTTCAGA CTGCTGTCTT AAAACGTAGT
CTAACAATGG ACATGGTTAC TAAAAAGATT ATTCAAGGTG AATACACTAG TCAGTGGCAA
AGCACAGAAA CATATCCTTC AGTAGCCGTT CCTGTTGTTG CAGGATACCA TACTAAAACT
AAAGAAGTAG TAGCTTGTCC CGTAGTAGAA GAAGACTTAA GCGAAGACAT TAAGTACTAT
GCAAATGGTT ATTTGATTCC AGTTGATGCA AATCATAATA AGCTTTCTGA AATAGATAAA
AAGCAATTAA TCACTAATTC TATTAATCCA ACGAAGGCAA TTTTCCCTAA ATTAGAGCTT
GAAAATATTG TCTTAAAGCC AATTAAAGGA GTAGAAATTA AAGATCCGGG ACGAGACTAT
GAAGTTCCAT ACTTATTAGT TCATAAATAT ATTGCCGTTG ATGAAAAGCA TCCTAGAGAG
GAAGTAAGTC CAGCATATTA TAGGAGAATT GTTACAGCTC GCGTTCATTA TCAAGGCGCT
GGCGACCAAA CTCCTGCTGA CGCAGAACAG ATAGTTACCT GGACAAGAAC AGTAACTTAT
GACGAAGTAA GTAGAGAAGT TATTGATAAT GGAATGTACA CGACAGAGTG GCTAGCTGAT
AAAGATATCT TTGAGGCAAC ACCTACGCCG GTTATTAAGG GATTTTGCGC TGATATTGGC
TTAATTGGCG AACATCCAGT TACAGAAACA GACTTAATGG CGACAGTTAC TTATATGCCA
GTTGGAAGAA TGATCCCAGT TGATGAACAT GGAAATGAAA TAAAAAATGC GATGCGTTCG
CCATACATTA ATGACCCATA TGATCCAGTG CGGGTACTTT TTACCGAAGA AGTTCCAGAA
GTACAAGGAT ATGCTCTGGT TAATAATACA ATTTCAGTTA ATGATCCATT TTCTGATACC
AAGGTAACTT ATACTTTGAA GCCTCGCTAT ATTCCAGTGA ATAGTGAACA CCCATATCGC
CCGATCAAGC CAACGATGTA TAGCGTGCCA GTTAAGGAAA CAGTTAAATA TCAGGGAGCT
GATGAGCAAA CGCCAATAGC TCGTTTGCAA GCAGCTCGAT GGACTAGAAC ATTAACAGTC
GATGAAAATA CTAGTGAATT AATAGACAAT GGTAAATATA CAACAGCTTG GAAAGTTGAT
AAAAATCGCT ATGCTGCAGT AAAAACACCG ATAATTGATG GCTATCATGC TGATAAGAAT
ATTATTGAAG CAAAAGAAGT TAAAAAAGCT GATCTTGATT TTACTGTAAT ATATAAAGCC
AATGGACGTA TAGTACCAGT TGATGCAAAA GGCAATTTGT TAGCTAGTGT TGATCAACCA
TCGTATGTAA CTGATCCAGA AGATGCAACA AAGGTTTTAC CAAAGCAGGG TGTACCTAGA
ATAATGAATT ATGTGCCAGA ACAAGAAGTG ATTACGGTAG GGGATGCTAG TGAAGATACA
CTAGTTAGAT ATTACACATT TAACGAATGG GGTGAATTAA AAGCTAAGAA AGCGGCTGAG
CAGAAACAGA AAGATTTAAA AACAAAGAAA CCGATTGAAA ATAAAGATGA GCAAGAAAAG
ATGGAAAAAG TAGAGGAAAG GCAATTAAAA TCAGCTGAAG AAGAGAAGAA ATCTGAGAAA
AAAGATACTG GTTTTAAATC CATGTTTTCT TGGCTTAAGT AG
|
|---|
| Protein sequence | MSVVVKYIDL DNNSAELASS ETLNGKVGER VNYHTAEEVQ KLIAAGYVLV NNPFDLNNEV
HFFNETSQEY KLTFKHAQEE VTAKNLKYDC QLGDVQLKGK QVVHYTGLEK NIADNIVEVT
FNRKIIYDKV TKQKVSLSAW QPEKYYLPLI ATPAVLDYTP DKTVIGGEAV TVQKPKHEYV
VTYLPNKKNA RRQKAEIKFI DVDNNNQELA SSGELKGKPG KEISYSTTET LKELSDKGYE
VINNDFDSKD QKPVFGNSRD YIQTFIIALR HKKQAVNSDH PSSEIDHRLY EKEVHRKITF
SGLSGQKLDD IVQTAVLKRS LTMDMVTKKI IQGEYTSQWQ STETYPSVAV PVVAGYHTKT
KEVVACPVVE EDLSEDIKYY ANGYLIPVDA NHNKLSEIDK KQLITNSINP TKAIFPKLEL
ENIVLKPIKG VEIKDPGRDY EVPYLLVHKY IAVDEKHPRE EVSPAYYRRI VTARVHYQGA
GDQTPADAEQ IVTWTRTVTY DEVSREVIDN GMYTTEWLAD KDIFEATPTP VIKGFCADIG
LIGEHPVTET DLMATVTYMP VGRMIPVDEH GNEIKNAMRS PYINDPYDPV RVLFTEEVPE
VQGYALVNNT ISVNDPFSDT KVTYTLKPRY IPVNSEHPYR PIKPTMYSVP VKETVKYQGA
DEQTPIARLQ AARWTRTLTV DENTSELIDN GKYTTAWKVD KNRYAAVKTP IIDGYHADKN
IIEAKEVKKA DLDFTVIYKA NGRIVPVDAK GNLLASVDQP SYVTDPEDAT KVLPKQGVPR
IMNYVPEQEV ITVGDASEDT LVRYYTFNEW GELKAKKAAE QKQKDLKTKK PIENKDEQEK
MEKVEERQLK SAEEEKKSEK KDTGFKSMFS WLK
|
|---|
| |