| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0026 |
|---|
| Symbol | |
|---|
| ID | 4440415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 25806 |
|---|
| End bp | 26549 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639671888 |
|---|
| Product | integral membrane protein |
|---|
| Protein accession | YP_813879 |
|---|
| Protein GI | 116628707 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5523] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.667689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTAAGAT TAGAATGGTT AGAAGTTAAT ATATTGTTAG AGAGAAGTAA TACTATGACA
CGTGCACAAA TGAAACAAGC TGCAAAAGAT CAACTACGCG GCAATTGGGG CTGGGCTATT
TGCCTAACTA TCTTTGCCTG GTTAGTTAAC GCAGTTATTA TGGATCTCAA CCGCTGGATC
TGGACTGGAA AAGACTTCAC TTATACTGTT CTACGCTTTA ATAAAGATAA CTTAATTCAA
GGATACAAGC CCGCCTATAA CCTATCAGAA ATTATTGTTG GTTTAATTAC CGGTTTAATT
TTATGGGGAG TTGCCTACAC AATCTTAGAT TTCGTTGAAA CAGGCAAGAT GGAGCCTTGG
TATTCTGGTA TTTTTAGTGC TTATAGCAAC GGACGCTTTA AGAATAGTTT ATTTACCCTA
TTTATGACTA ATTTATTCGT TAGTTTATGG ACCATTTTAT TTATTATTCC TGGTTTTATT
AAAGGTTATT CCTATGCCAT GACACCTTAT ATCTTAAAAG ATAAGTTTTC AGCTGGTCAA
ACTGATATTG GAGCAACTGA AGCTATTACC GAAAGTCGTA AGTTAATGGA TGGACATAAG
ATGGACTTAT TTGTTCTAGA CTTAAGTTTC ATTGGTTGGG GCTTACTTGG TTTAATCACT
TGCGGTATTG GATTTATTTG GATTACTCCT TACTACCGTC AAACTAAAGC CAACTTTTAT
CGTTCTTTAG TTGCTAATAA TTAA
|
|---|
| Protein sequence | MVRLEWLEVN ILLERSNTMT RAQMKQAAKD QLRGNWGWAI CLTIFAWLVN AVIMDLNRWI
WTGKDFTYTV LRFNKDNLIQ GYKPAYNLSE IIVGLITGLI LWGVAYTILD FVETGKMEPW
YSGIFSAYSN GRFKNSLFTL FMTNLFVSLW TILFIIPGFI KGYSYAMTPY ILKDKFSAGQ
TDIGATEAIT ESRKLMDGHK MDLFVLDLSF IGWGLLGLIT CGIGFIWITP YYRQTKANFY
RSLVANN
|
|---|
| |