| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0021 |
|---|
| Symbol | |
|---|
| ID | 4440410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 21954 |
|---|
| End bp | 22472 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639671883 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_813875 |
|---|
| Protein GI | 116628703 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 0.614815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA AAGAAACTAG ATTCGAAAAA TATATGAAAT TTTGGTACGG AATTTCTGGT
CCACTTGATG AGCAGAAGCG TCAAGTTATG AATCGAATTG GGAATAGGGC ATTTTTTATT
TTCTTTTTAG GGATGGATGC AGCATTCTTA ATTTCTCTGG TTTTAATTTC TTTCTATGGA
GCAAACGTTG CATACATTTT TCTTAGCGGT AGTTTTTTTG TAATGCTAAT GATTGTTAGT
TTTTATGTAA TGTTTCAATC CAAGAAATTT AAATTAACGG ATAATGAGAT AGAAAAAAAT
GAAGTCTCTA ATGCTAAAAA GTCTGCTTGG ATAAGAGGAA TGATGTCAGG TTTATTTTTT
GGAATTATGA TGTTGATCCT AAATTTTCTG ACTAGCTACG GTGATGGTTC TTGGACCTGG
ATTGAGATTC CTTCTAGTAT AATTGGGGGT CTATTCTTTG GTATTGTTAT GTCATTAGTT
TGGGTTCACA GAATTAAAGT AGTAAAAGAC GAAGATTAA
|
|---|
| Protein sequence | MKAKETRFEK YMKFWYGISG PLDEQKRQVM NRIGNRAFFI FFLGMDAAFL ISLVLISFYG
ANVAYIFLSG SFFVMLMIVS FYVMFQSKKF KLTDNEIEKN EVSNAKKSAW IRGMMSGLFF
GIMMLILNFL TSYGDGSWTW IEIPSSIIGG LFFGIVMSLV WVHRIKVVKD ED
|
|---|
| |