Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0017 |
Symbol | |
ID | 4438902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 19556 |
End bp | 20257 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639671879 |
Product | Mg2+ transporter |
Protein accession | YP_813872 |
Protein GI | 116628700 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 95 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.0915905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGGTT TAACATCACT TTCAACTGAA TTAGATTGGT TACTACGAAT TTTAGTTGCC GCTCTTTGCG GAACAGCAAT CGGCTATGAA CGTGCCACTC AAAGAAAAAG CGCAGGCATT AGAACTCACA TGGTTGTTGC CGTCGCCTCT GCTCTATTTA TGCTAGTTTC TAAATATGGC TTCTTTGACT TATTATCACT ACATGATATT TCACTTGATC CATCAAGAAT TGCAGCTCAA ATTGTAACTG GAATTTCCTT TATTGGTGCC GGTACAATCC TAGTTAGACG AGAACAGATT TCTGGTTTAA CTACTGCAGC TGGTGTTTGG GCAACTGCTG CTATCGGTAT GGCAGTGGGT GCTGGAATGT ATGTCATCGG AATTGTCAGC ACAGTCTTTT TATTCATTAT CCAAATTATT TTTCATGATG ATACATTTAT TAATTTTATT ATTCTTCATG TTCGCTTTAA CGTTCAAATT GAAGCCAATA ACCGTCCCGA CGTTCTCAAT GAATTGAAAA AAGAACTAGC TTTAAACGAA GTTGAACAAA TTTCTATTAA AATTATTGAT GTAACTTCCG AACACATTGT TGTTAATGTA GATGGCGTCA TCAAGAATAG AAAAGATGAA AATGACATCA TCCTAGCTCT TGAAAAAGAC CAAAATATTC GCCGAATTAA TTCTACTCAC GGAGCAAAAT AA
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Protein sequence | MVGLTSLSTE LDWLLRILVA ALCGTAIGYE RATQRKSAGI RTHMVVAVAS ALFMLVSKYG FFDLLSLHDI SLDPSRIAAQ IVTGISFIGA GTILVRREQI SGLTTAAGVW ATAAIGMAVG AGMYVIGIVS TVFLFIIQII FHDDTFINFI ILHVRFNVQI EANNRPDVLN ELKKELALNE VEQISIKIID VTSEHIVVNV DGVIKNRKDE NDIILALEKD QNIRRINSTH GAK
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