Gene LGAS_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0017 
Symbol 
ID4438902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp19556 
End bp20257 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content36% 
IMG OID639671879 
ProductMg2+ transporter 
Protein accessionYP_813872 
Protein GI116628700 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones95 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.0915905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGGTT TAACATCACT TTCAACTGAA TTAGATTGGT TACTACGAAT TTTAGTTGCC 
GCTCTTTGCG GAACAGCAAT CGGCTATGAA CGTGCCACTC AAAGAAAAAG CGCAGGCATT
AGAACTCACA TGGTTGTTGC CGTCGCCTCT GCTCTATTTA TGCTAGTTTC TAAATATGGC
TTCTTTGACT TATTATCACT ACATGATATT TCACTTGATC CATCAAGAAT TGCAGCTCAA
ATTGTAACTG GAATTTCCTT TATTGGTGCC GGTACAATCC TAGTTAGACG AGAACAGATT
TCTGGTTTAA CTACTGCAGC TGGTGTTTGG GCAACTGCTG CTATCGGTAT GGCAGTGGGT
GCTGGAATGT ATGTCATCGG AATTGTCAGC ACAGTCTTTT TATTCATTAT CCAAATTATT
TTTCATGATG ATACATTTAT TAATTTTATT ATTCTTCATG TTCGCTTTAA CGTTCAAATT
GAAGCCAATA ACCGTCCCGA CGTTCTCAAT GAATTGAAAA AAGAACTAGC TTTAAACGAA
GTTGAACAAA TTTCTATTAA AATTATTGAT GTAACTTCCG AACACATTGT TGTTAATGTA
GATGGCGTCA TCAAGAATAG AAAAGATGAA AATGACATCA TCCTAGCTCT TGAAAAAGAC
CAAAATATTC GCCGAATTAA TTCTACTCAC GGAGCAAAAT AA
 
Protein sequence
MVGLTSLSTE LDWLLRILVA ALCGTAIGYE RATQRKSAGI RTHMVVAVAS ALFMLVSKYG 
FFDLLSLHDI SLDPSRIAAQ IVTGISFIGA GTILVRREQI SGLTTAAGVW ATAAIGMAVG
AGMYVIGIVS TVFLFIIQII FHDDTFINFI ILHVRFNVQI EANNRPDVLN ELKKELALNE
VEQISIKIID VTSEHIVVNV DGVIKNRKDE NDIILALEKD QNIRRINSTH GAK