Gene LGAS_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0012 
SymbolrplI 
ID4438897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp13266 
End bp13730 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content36% 
IMG OID639671874 
Product50S ribosomal protein L9 
Protein accessionYP_813867 
Protein GI116628695 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0359] Ribosomal protein L9 
TIGRFAM ID[TIGR00158] ribosomal protein L9 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.181348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value2.09307e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAATTCA TGAAGGTTAT TTTTATTAAA GACATGAAGG GTAAAGGTAA GCGTGGAGAA 
GTTAAGAACG TACCCGATGG CTACGCTCAG AATTTTTTGA TTAAAAATGG TTATGCAAAA
GAAGCTACTA GCTCCAACTT AAATACCTTA AAACGTGTTC AAAAGGCAGA AAAAGATGCT
TACGAAGCAG AAAAAGCAGC AGCTGAGGAT ATTAAGAAAA AACTTGAAGA TGACAAGACT
ATCGTAAACT TTAAGTCTAA AGCTGGCACT GACTCTCGTT TATTCGGCTC TATTTCAAGT
AAGAAGATTG TTGAAGGACT TGAAAAGCAA TATGGTATTA AAGTCGACAA GCGTAAATTG
GAGCTTCCAG AGCCAATTAA ATCTTTAGGA TACACAAATG TACCTGTTAA GCTATTTAAA
GGCGTAGAAG CAGTAATTCG CGTTCACATT ACGGAGCAAG ACTAA
 
Protein sequence
MKFMKVIFIK DMKGKGKRGE VKNVPDGYAQ NFLIKNGYAK EATSSNLNTL KRVQKAEKDA 
YEAEKAAAED IKKKLEDDKT IVNFKSKAGT DSRLFGSISS KKIVEGLEKQ YGIKVDKRKL
ELPEPIKSLG YTNVPVKLFK GVEAVIRVHI TEQD