Gene LGAS_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0010 
Symbol 
ID4438895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp10222 
End bp10908 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content32% 
IMG OID639671872 
ProductMg2+ and Co2+ transporter 
Protein accessionYP_813865 
Protein GI116628693 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000139051 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00000000019085 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTATTA AGCAAAAATT AGCCGGAAAT ATTGATTTTG ACTATAAATG GTACGATATT 
TATAACTGTG ATGATCATGA TATAAGATTA TTGAAGGATG ACTTTGATTT AACTTCAGAA
ATTATTTCTT ATATCACCGA CCTTCACGAG CGTCCCCACT TTGATCATGA CTACATTACC
AATAGTGATT TGTTAGTTTA TGATGTGCCA GTTTGGCCAA CAGCAGATGC AGACCATTTC
ACTACTTTAC CAATTAAGTT TTTGATGGTT GGACATACTC TTTTTACAGT TCATTCTCCT
GACACAACTT ATATGATTGA AGAATTTAGG CAGAAGCCAG ATGAACATAT TCATAGTGAA
AAAGAACTGA TTTTTGCAAT TTTATTTGCA GTTACTAAAT ATTTTCAAAG AGCCTTGAGT
CAGCTGAATA GTCAGAGACT GGTTTTAGAT AATCACTTAA GTGAGAGGAT TCACAATAAA
GACTTGCAAG AGTTATCACA AGTTGAAAAA AGTTTAGTTT ATTTGTCTAG CTCAATTAGG
ACTAATCTAA TGATGCTTGA GAGCTTAAAA AATAAAAAAT CAGGTCTTCA TATGAATGCG
TCTGAAGAAG AAATGTGTGA TGACATTATT ATTGAAGTTC AGCAGTCCTC GCAAATGATC
AAAATTTATA GCGAAGTGAC TGAATAA
 
Protein sequence
MIIKQKLAGN IDFDYKWYDI YNCDDHDIRL LKDDFDLTSE IISYITDLHE RPHFDHDYIT 
NSDLLVYDVP VWPTADADHF TTLPIKFLMV GHTLFTVHSP DTTYMIEEFR QKPDEHIHSE
KELIFAILFA VTKYFQRALS QLNSQRLVLD NHLSERIHNK DLQELSQVEK SLVYLSSSIR
TNLMMLESLK NKKSGLHMNA SEEEMCDDII IEVQQSSQMI KIYSEVTE