Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0010 |
Symbol | |
ID | 4438895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 10222 |
End bp | 10908 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639671872 |
Product | Mg2+ and Co2+ transporter |
Protein accession | YP_813865 |
Protein GI | 116628693 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0598] Mg2+ and Co2+ transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000139051 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00000000019085 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTATTA AGCAAAAATT AGCCGGAAAT ATTGATTTTG ACTATAAATG GTACGATATT TATAACTGTG ATGATCATGA TATAAGATTA TTGAAGGATG ACTTTGATTT AACTTCAGAA ATTATTTCTT ATATCACCGA CCTTCACGAG CGTCCCCACT TTGATCATGA CTACATTACC AATAGTGATT TGTTAGTTTA TGATGTGCCA GTTTGGCCAA CAGCAGATGC AGACCATTTC ACTACTTTAC CAATTAAGTT TTTGATGGTT GGACATACTC TTTTTACAGT TCATTCTCCT GACACAACTT ATATGATTGA AGAATTTAGG CAGAAGCCAG ATGAACATAT TCATAGTGAA AAAGAACTGA TTTTTGCAAT TTTATTTGCA GTTACTAAAT ATTTTCAAAG AGCCTTGAGT CAGCTGAATA GTCAGAGACT GGTTTTAGAT AATCACTTAA GTGAGAGGAT TCACAATAAA GACTTGCAAG AGTTATCACA AGTTGAAAAA AGTTTAGTTT ATTTGTCTAG CTCAATTAGG ACTAATCTAA TGATGCTTGA GAGCTTAAAA AATAAAAAAT CAGGTCTTCA TATGAATGCG TCTGAAGAAG AAATGTGTGA TGACATTATT ATTGAAGTTC AGCAGTCCTC GCAAATGATC AAAATTTATA GCGAAGTGAC TGAATAA
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Protein sequence | MIIKQKLAGN IDFDYKWYDI YNCDDHDIRL LKDDFDLTSE IISYITDLHE RPHFDHDYIT NSDLLVYDVP VWPTADADHF TTLPIKFLMV GHTLFTVHSP DTTYMIEEFR QKPDEHIHSE KELIFAILFA VTKYFQRALS QLNSQRLVLD NHLSERIHNK DLQELSQVEK SLVYLSSSIR TNLMMLESLK NKKSGLHMNA SEEEMCDDII IEVQQSSQMI KIYSEVTE
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