| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0008 |
|---|
| Symbol | |
|---|
| ID | 4438893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 9351 |
|---|
| End bp | 9869 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639671870 |
|---|
| Product | single-stranded DNA-binding protein |
|---|
| Protein accession | YP_813863 |
|---|
| Protein GI | 116628691 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000000612973 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0000000000172856 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATA ATGTTGTACT TGTTGGCCGT TTAACACGTG ATCCTGATTT ACGTACAACC
GGGAGTGGAA TCTCAGTTGC TACGTTTACT CTAGCTGTTG ACCGTCAATA CACCAATAGT
CAAGGTGAAC GTGGTGCTGA TTTCGTCAGC TGTGTAATTT GGCGTAAAGC TGCAGAGAAT
TTTGCTAACT TTACTTCCAA GGGTTCACTA GTTGGTATTC AAGGTCGGAT TCAAACTAGA
ACGTATGATG ATAAAGATGG TAAGAGAGTC TACGTGACTG AAGTCATCGT TGATAATTTC
TCTTTACTAG AATCACGTCG CGACCGTGAA AATCGTCAGA CTAATGGTGG TAATTTTGCT
CCGCAAGGAG GAAATGCTCC AAGTACCAAT AACTTTGGTG GATCAAGTGC ACCAAGCACT
AATAATGCTC CTGCTGGTGG AGAAAGCAAT AAACCGCAAG ATCCATTTGC AGATTCAGGT
AGCACTATTG ATATCTCGGA TGATGATCTC CCATTTTAA
|
|---|
| Protein sequence | MINNVVLVGR LTRDPDLRTT GSGISVATFT LAVDRQYTNS QGERGADFVS CVIWRKAAEN
FANFTSKGSL VGIQGRIQTR TYDDKDGKRV YVTEVIVDNF SLLESRRDRE NRQTNGGNFA
PQGGNAPSTN NFGGSSAPST NNAPAGGESN KPQDPFADSG STIDISDDDL PF
|
|---|
| |