| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0002 |
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| Symbol | |
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| ID | 4439758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1681 |
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| End bp | 2811 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639671864 |
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| Product | DNA polymerase sliding clamp subunit |
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| Protein accession | YP_813857 |
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| Protein GI | 116628685 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000188302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 1.4129e-28 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCAGTTTA CAATTAATCG TAATTTATTC CTCGAAAACC TAAATAATGT AATGCGTGCA
ATTTCTTCAC GTGCAACTAT TCCAATTTTA AGTGGTATAA AACTTAACCT TACTGATGAG
ATGCTAACTT TAACCGGTAG TGACACTGAC ATTTCGATCG AAATTCAGAT TCCTGTAAAC
GATGATCTAG TTGTTCAATC TACAGGTTCG ATTGTTTTAC CTGCACGCTT TTTTAGTGAG
ATCGTTAAAA AATTACCTGG TAAAGACTTT TCATTTGAAG TAAGAGAAAG CTTCCAGACT
AAAATTGTTT CTGAAAATAC TGAATTTATG ATCAATGGCT TGGATGCAAA TAACTATCCT
CATCTACCAG AAATTTCTAC TGATGCCTCA TTTAAGATTT CAGGTAAAAC TTTTAGAGAA
ATTATTAATG AAACTGTTTT TGCTGTTGCT ACTCAAGAAA GTCGTCCTAC TTTAACAGGT
GTTAATTTCA TTTTTAATAA CTCATCAATT AAGGCAGTTG CTACCGACAG TCACCGTTTA
TCACAGCGTC AAATTTCTTT AGAAAACGGC CCACAAACTA GTACTGACTT AATAATTCCA
GGAAAGAGTT TAGTAGAATT AGCTAGAATT ATTGGTGAAA ACGATCCTGA AATTACAGTA
AATCCAGGTG AGAACCAAGT TTTATTTGAA GTCGGAAATA TTGCATTCTA TTCCCGTTTG
CTTGATGGTC AATATCCAGA TACTGATCGT TTAATTCCAA CTGAATCTAC TACTTCTGTT
GAATTTGAAC TGCCAGTTTT AGCTAGGTCT CTAGAACGTG CAAGTCTTCT TACGCATGAA
AGTCGAAATA ACGTAGTAAA AATGACTCTT GATGTTCAAA ATCAATTAGT TAAGCTTCAA
GGTGATTCTC CAGAGATAGG TAATGTGGAA GAAGAAATTA GTTTTAAGAA GCTTGAAGGC
GAAGGTTTGA CAATTTCATT TAACCCTGAC TATTTAAGAG AGGCTTTGCG CGCATCAATT
ACTGATTCCA TTATTATGAA CTTTACGCAG CCATTGAGAC CATTTACAGT TGTACCTGCA
AAGCAGGATG TCAACTTTAC GCAACTGATT ACTCCAGTGA GAACATTTTA A
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| Protein sequence | MQFTINRNLF LENLNNVMRA ISSRATIPIL SGIKLNLTDE MLTLTGSDTD ISIEIQIPVN
DDLVVQSTGS IVLPARFFSE IVKKLPGKDF SFEVRESFQT KIVSENTEFM INGLDANNYP
HLPEISTDAS FKISGKTFRE IINETVFAVA TQESRPTLTG VNFIFNNSSI KAVATDSHRL
SQRQISLENG PQTSTDLIIP GKSLVELARI IGENDPEITV NPGENQVLFE VGNIAFYSRL
LDGQYPDTDR LIPTESTTSV EFELPVLARS LERASLLTHE SRNNVVKMTL DVQNQLVKLQ
GDSPEIGNVE EEISFKKLEG EGLTISFNPD YLREALRASI TDSIIMNFTQ PLRPFTVVPA
KQDVNFTQLI TPVRTF
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