| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1731 |
|---|
| Symbol | |
|---|
| ID | 4416338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1652408 |
|---|
| End bp | 1652806 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639669890 |
|---|
| Product | cytidine deaminase |
|---|
| Protein accession | YP_811240 |
|---|
| Protein GI | 116491696 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0295] Cytidine deaminase |
|---|
| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG CGGAATATTC GGCATTAAAA AAGGTTGCCG ACCAAGAACT AGATAAAGCT
TATATTCCTT ACAGCCATTT CGCTGTTGGC GCTGCTCTTT TATCGGCTGA TGATCGAATT
TTTCCCGGCT GCAACATTGA AAATGCTGCT TTTGGTTCAA CAATGTGTGC CGAACGGACG
GCAATTTTTT CAGCTGTTGC CGCTGGTTGC CACCAGTTCA AAGCTCTGGT TATTTCCGGG
CGAACCGAGG GCGCAATTGC TCCCTGTGGG GCATGCCGTC AGGTGATGGT GGAATGGTTC
GATAAAAAAA TGCCGATATA TTTAACCAAT ACATCCGGAA AAGTTGTCAA AACCGATTTA
GACCATTTAT TGCCAGCATC TTTTGAAGAT TTAAAGTGA
|
|---|
| Protein sequence | MTEAEYSALK KVADQELDKA YIPYSHFAVG AALLSADDRI FPGCNIENAA FGSTMCAERT
AIFSAVAAGC HQFKALVISG RTEGAIAPCG ACRQVMVEWF DKKMPIYLTN TSGKVVKTDL
DHLLPASFED LK
|
|---|
| |