| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1504 |
|---|
| Symbol | |
|---|
| ID | 4416057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1420539 |
|---|
| End bp | 1421252 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639669676 |
|---|
| Product | lipopolysaccharide synthesis sugar transferase |
|---|
| Protein accession | YP_811028 |
|---|
| Protein GI | 116491484 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAC GATTCAGGAA TTTTAATTTT TTAGGAAGAA TTTGGATGAT GAGTGAGGAC
AATGACTTTA AAGTTAAGAA CTTGGATGGG TATGCAAAGA AGAATTTTTT TTATTATGCC
AATAAAAGAA TCTTTGATGT TCTCGGTGGC TTAATTGGTT TAACGATTTC TGCGATTCCA
ATTGCAATTT TTGCGGTTAT TATCAAAAAA GATGGTGGCC CGGCTTTTTA CACCCAAAGG
CGAATTGGTC TGCATGGCAA ATCTTTTTTG ATGTATAAAT TGCGTAGCAT GGTCCTAGAT
GCTGATTTGA AAAGGGTCAG GTTATTGGAC AAAAATGAGA AGCGTGATGG TTTTTTTAAA
ATTAAAAGAG ATCCACGGGT CACTAAAATT GGTCATTTTC TTCGTGGCCA TTCTTTGGAT
GAACTACCGC AATTTTGGAA TGTCCTAAAG GGCGACATGT CTTTGGTTGG ACCCCGCCCA
CCCCTACATA GTGAAGTAGA AAAGTATAAT GATTATCAAA TTCAGCGTCT ATTGGTTCAT
CCGGGGATGT CTGGTCTGTG GCAAATTTCT GGTCGTTCCA ATCTGGATTT TGAGGATATG
ATTGCGCTTG ATCTTAAATA TATTAATGAA CGTTCAACTT GGGGCGATAT AAAAATTTGT
TTTAAGACGA TTGCCGTTAT TTTTAAACGT GGGGAAGATG TGGGCGCTTA TTAA
|
|---|
| Protein sequence | MAQRFRNFNF LGRIWMMSED NDFKVKNLDG YAKKNFFYYA NKRIFDVLGG LIGLTISAIP
IAIFAVIIKK DGGPAFYTQR RIGLHGKSFL MYKLRSMVLD ADLKRVRLLD KNEKRDGFFK
IKRDPRVTKI GHFLRGHSLD ELPQFWNVLK GDMSLVGPRP PLHSEVEKYN DYQIQRLLVH
PGMSGLWQIS GRSNLDFEDM IALDLKYINE RSTWGDIKIC FKTIAVIFKR GEDVGAY
|
|---|
| |