| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1445 |
|---|
| Symbol | |
|---|
| ID | 4415914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1359761 |
|---|
| End bp | 1360612 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639669619 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_810971 |
|---|
| Protein GI | 116491427 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGAA ATATGAAATA TATGATTACC GGCGCTAATG GGCAGCTTGG TCAAGAACTC
CATGAATTAT TAGAGGATCG TGGTCTTGAT TTTGTTGCTT ACGATTCAAA AACTTTAGAT
ATAACTAACC GACAATTGGT TTTTGAAGCA ATCGAAGCTC AAAAACCGGA TGTTGTTTTG
GATGCAGCAG CCTATACCAA AGTCGATGCG GCCGAAGACG AGGGAAAACA GATCAACTGG
CAGGTTAATC GAGATGGCAG TAAGAATTTA GCACAAGCAG CTAAAGCTTT TGCCAGTAAA
TTGGTTTATA TTTCAACTGA TTATGTTTTC GATGGTACTT CCAGCGACGA ATATTCAGAG
AATGACCCGA CTAATCCTAA AAACGAATAC GGTAAAGCGA AATTAGCCGG TGAAAAAGCG
ATTTTGGATG CTGCTGTTGA TGCATATATT ATTCGGACCA GTTGGGTTTT TGGAAAATAC
GGAAATAATT TTGTTTATAC GATGCAAAAA TTAGCTAAAA CGCATCCAAA ATTAACGGTT
GTTAACGATC AGGTCGGAAG ACCAACGTGG ACAAAAACAC TAGCTGAATT CATACTCTAT
TTAATCGATC ATCAGGCAGC TTACGGAACT TATAATTTAT CTAATCGGGG AACGGCCAGC
TGGTATGATT TTGCCAAAGA AATTTTAAAC AACTATTCGC TTGAAATAAA AGCGGTTAAT
TCAGATCAGT TTCCTCAAAA AGCCTATCGC CCGCGGCATT CGGTTTTAAG TTTAAAAAAA
TCTCAACAAA CAGGTTTTAT AATCCCAACT TGGCAGGAAG CTTTGAAAAT GTCGGGTATG
ATAGATAAGT AA
|
|---|
| Protein sequence | MIRNMKYMIT GANGQLGQEL HELLEDRGLD FVAYDSKTLD ITNRQLVFEA IEAQKPDVVL
DAAAYTKVDA AEDEGKQINW QVNRDGSKNL AQAAKAFASK LVYISTDYVF DGTSSDEYSE
NDPTNPKNEY GKAKLAGEKA ILDAAVDAYI IRTSWVFGKY GNNFVYTMQK LAKTHPKLTV
VNDQVGRPTW TKTLAEFILY LIDHQAAYGT YNLSNRGTAS WYDFAKEILN NYSLEIKAVN
SDQFPQKAYR PRHSVLSLKK SQQTGFIIPT WQEALKMSGM IDK
|
|---|
| |