| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1363 |
|---|
| Symbol | |
|---|
| ID | 4415721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1265542 |
|---|
| End bp | 1268208 |
|---|
| Gene Length | 2667 bp |
|---|
| Protein Length | 888 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639669538 |
|---|
| Product | cation transport ATPase |
|---|
| Protein accession | YP_810894 |
|---|
| Protein GI | 116491350 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.516611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCTAAAA AAAACTTTTA CAACCAAAAT ATCAAGGAAG TTGTTGACCA ATTTGCTTCC
GATAAAAGTA GAGGCCTCAG CCAAGCCGTC GCCAATCAGA AATTAAAAAC AGATGGTCCA
AATGTTTTAA ATAAAGCTAA GCGAACTACT TTATTGCAGA AATTCATCAA TCAATTCAAG
GATTTTATGA TTGCGATCTT GGCGGTTGCA GCCGTCATTG CGGCAATGAC TGGCGAGTTG
GTCGATGCGA TTTTTATTTT GCTGGTCGTT GTCTTGAATG CAATTTTTGG TGTCTTCCAG
GAATCAAAAG CAGAAGATGC GATTGAAGCT TTAAAAAAGA TGTCGACTCC GAATGCCAAT
GTTCGCCGTG ATGGCAAAGT TGTTTCATTG CCGGCAACGG AACTTGTGAC CGGCGACATT
GTCTTAATGG AAGCTGGTGA CATTGTCCCG GCCGATCTGC GTTTGATCGA AGCAAATTCT
TTAAAAATCG AAGAAGCAGC CTTAACCGGC GAATCTGTTC CGGTTGAAAA ATCTGCGGCT
GTTTTAAGGT CTAAAAAACC AAGTCTCGGC GATCGTCATA ATATGGTTTT CATGAACACA
AACGTCACAT ATGGGCGTGG AGTTGGGATA GTTGTGGCTA CGGGGATGAA AACCGAGGTT
GGTCATATTG CCAGTATGCT GGAGCAGACA AAAGAGAGTG CTACTCCGCT GCAGGCCAAT
TTAAAACAAC TCGGGAAAAG TCTGACTTAT TTAATTCTTG TTATTTCGAT AATTGTTTTT
GTGATTGGAA TAATCAAAGG AGCGGAATCC TGGGTCAACA TGTTGCTGAC AGCAATTAGT
ATTGCTGTAG CGGCGATTCC AGAAGGCTTA CCAGCGATTG TTACAATTAC GTTGGCGCTG
GGCACCGGTC GTTTGGCAAA GAAAAATGCT TTAATGAGAC GTTTGGCGGC GGTTGAAACC
TTGGGATCGA CCGAAATAAT CGGTTCGGAT AAAACCGGCA CCTTAACACA GAACAAGATG
ACCGTTGAAA AATATGTTGT CAGTAATCAA GTTGTAGATG CGGACCAGCC GATTAAAAAG
GATCCAACTG CCGAAAAATT AGCACTTGTA ATGGCCCTGA ATAATGATAC AAAAATGACT
GAGGAGGGTT TATTGGGCGA CCCAACTGAA ACTGCTCTTA TTTCATTTAA CGAAAAGCAG
GGCCAGGACT TGAATCATTT GTTTAACAGG ATGCCGCGAG TTGCCGAAAT ACCATTTGAT
TCGGAACGAA AATTAATGAC AACCGTTAAT AAGAATTCCA ACCAATATAT TGTTACTGTC
AAAGGTGCAC CCGACGAGTT ACTGCGCCGG ACATCAAAAA TTGAAATTTC CGGAAAAGTC
TCAGTTTTAA CAAATGAAAA CCGACAAAAA TTGTTAGAAA TTAATCATCG ATTGGCAAAA
CAGGCTTTGC GTGTCTTGGC ATTTGCCTAT CAAAATGTTA AGGAAGTTCC TGGAAAATTA
ACGAGCAAGG CAGTTGAAAA AGATCTTGTT TTTGTTGGTT TTGTCGCGAT GATCGATCCG
GAACGTCCAG AAGTAGCTCA GGCCGTTAAA GAAGCTCGCC GGGCGGGTAT TCGGCCGATT
ATGATCACTG GGGACCATAA GGACACGGCT GCCGCAATTG CAAGACGTCT GGGAATTCTG
ACTGCCGATC AGGGACCCGA GGCCGTAATC ACTGGAGCCC AGCTGGATCA AATTCCTGAT
GATAAATTTC AGGACAGTGT TACTCAATAT AGTGTTTACG CGCGTGTTGC TCCGGAACAT
AAAGTCAGAA TTGTCAATGC CTGGAAAAAA CGCGGTAAGG TTGTCGCGAT GACTGGGGAT
GGTGTTAATG ATGCTCCGGC TTTGAAAACA GCCGATATCG GTGTGGCCAT GGGAATTACC
GGGACAGAGG TTTCAAAGGG CGCTTCCGAT ATGGTTCTGG CTGATGACAA TTTTGCTACG
ATCGTTAATG CAGTCAAGGA AGGCCGGACT GTTTTCGCTA ATATTCAAAA AGCATTACAG
TATTTGCTTT CTTCCAACTT GGCTGAAGTT ATGACCTTGT TCACTATGAC TATCTTGGGA
TGGGAACTTT TCGCGCCTGT CATGATTCTT TGGATTAATT TGGTAACTGA TACTTTTCCG
GCAATCGCAC TTGGTCTGGA ACCATCGGAA ACAGGTATCA TGAATCGTCC ACCTCGCGGT
AAAACATCCA GCTTTTTGTC GGATGGGGTT GGTATTGCAA TCATTTGGCA GGGTATCGTT
CAGGCTCTGA CGGTTTTGGC AGTTTATGCT TTGGCAATTG CTTATCCGGA TCATGCGGGC
AATATAAATC TTATTCATCG GGATGCTTTG ACGATGGCTT TTATGACGCT TGGATTGATG
CAGCTTTTTA ATGCCTTTAA TGTTAAATCC GTCTACCAGT CGATTTTTAA AATCAGACCT
TTTGCAAATA AATACTTTAA TGGAGCTATT TTGTTCAGCT TGCTTTCGAT GGCGATTGTC
GTTTTTTTGC CGGGTCTAAA CGATATTTTT CACGTTTCCG ATTTAAATTT GGGTCAGTGG
TTAATTGTTT TGGCTGCCTC TTTTTCAATC ATTTTAATTG TTGAAGTAGT AAAATTATTC
GAGCACCTTG TTTTAAAGAA GAGATAA
|
|---|
| Protein sequence | MPKKNFYNQN IKEVVDQFAS DKSRGLSQAV ANQKLKTDGP NVLNKAKRTT LLQKFINQFK
DFMIAILAVA AVIAAMTGEL VDAIFILLVV VLNAIFGVFQ ESKAEDAIEA LKKMSTPNAN
VRRDGKVVSL PATELVTGDI VLMEAGDIVP ADLRLIEANS LKIEEAALTG ESVPVEKSAA
VLRSKKPSLG DRHNMVFMNT NVTYGRGVGI VVATGMKTEV GHIASMLEQT KESATPLQAN
LKQLGKSLTY LILVISIIVF VIGIIKGAES WVNMLLTAIS IAVAAIPEGL PAIVTITLAL
GTGRLAKKNA LMRRLAAVET LGSTEIIGSD KTGTLTQNKM TVEKYVVSNQ VVDADQPIKK
DPTAEKLALV MALNNDTKMT EEGLLGDPTE TALISFNEKQ GQDLNHLFNR MPRVAEIPFD
SERKLMTTVN KNSNQYIVTV KGAPDELLRR TSKIEISGKV SVLTNENRQK LLEINHRLAK
QALRVLAFAY QNVKEVPGKL TSKAVEKDLV FVGFVAMIDP ERPEVAQAVK EARRAGIRPI
MITGDHKDTA AAIARRLGIL TADQGPEAVI TGAQLDQIPD DKFQDSVTQY SVYARVAPEH
KVRIVNAWKK RGKVVAMTGD GVNDAPALKT ADIGVAMGIT GTEVSKGASD MVLADDNFAT
IVNAVKEGRT VFANIQKALQ YLLSSNLAEV MTLFTMTILG WELFAPVMIL WINLVTDTFP
AIALGLEPSE TGIMNRPPRG KTSSFLSDGV GIAIIWQGIV QALTVLAVYA LAIAYPDHAG
NINLIHRDAL TMAFMTLGLM QLFNAFNVKS VYQSIFKIRP FANKYFNGAI LFSLLSMAIV
VFLPGLNDIF HVSDLNLGQW LIVLAASFSI ILIVEVVKLF EHLVLKKR
|
|---|
| |