Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1316 |
Symbol | rpsL |
ID | 4415157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 1225089 |
End bp | 1225502 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639669496 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_810853 |
Protein GI | 116491309 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000011083 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACTA TTAACCAATT AGTTCGCAAG CCTCGCAAGC CAAGGACTTT CAAGTCCAAG GTTCCAGCTT TGAACTTTGG ATATAATTCT ATGTCCAGAA AACAAACCAA CAATACTGCT CCGCAAAAAC GCGGTGTTGC TACTCGTGTC GGAACAATGA CACCTAAAAA GCCCAATTCG GCTCTTCGTA AGTATGCTCG TGTTCGTCTT TCAAACCAGT ATGAAGTTAC TGCCTACATT CCAGGAATTG GCCACAACCT TCAAGAACAC TCTGTTGTTT TAATTCGTGG AGGACGTGTT AAGGATCTTC CTGGTGTTCG TTACCACATT ATTCGTGGTG CCCTTGATAC CGCCGGAGTT GAAGGCCGTA TGAACGGACG ATCAAAATAT GGCGCAAAGC GGCCAAAGAA GTAA
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Protein sequence | MPTINQLVRK PRKPRTFKSK VPALNFGYNS MSRKQTNNTA PQKRGVATRV GTMTPKKPNS ALRKYARVRL SNQYEVTAYI PGIGHNLQEH SVVLIRGGRV KDLPGVRYHI IRGALDTAGV EGRMNGRSKY GAKRPKK
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