Gene OEOE_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_1228 
Symbol 
ID4416950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp1148285 
End bp1148680 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content38% 
IMG OID639669413 
ProductRNA-binding protein 
Protein accessionYP_810770 
Protein GI116491226 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1098] Predicted RNA binding protein (contains ribosomal protein S1 domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0834946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATA AAATTGGCCA AAGAGTAACT GGAACTGTTT CCGGAATTCA AAATTACGGT 
GTTTTTGTGC AACTTGATTC GAAGACACAG GGTTTGGTTC ATATTTCGGA ATGCAAAAAC
GGTCGGATTG ATAATTTACC GGAAGAATTT CATATAGGGC AGCCGGTCGA GGCAATTATC
CTTGATATCG ACAACTATAG TAAAAAAATT AGTTTGAGTT TTCGTCAATT ATCGATTCCA
AAAGTTCATG CAAATCCAAA ACCTGGAGAA AATCGTAATA TTTACAAGCA TTTTTGGACA
GCGACAAGGG TAAAGGCCGG TTTTAAGCCA ATCGCAGAGA CAATCGAGGC TAGCAAAAGC
GAAGCTTTAG GCCGAATTCG GGGAAATAAA AAATAA
 
Protein sequence
MDYKIGQRVT GTVSGIQNYG VFVQLDSKTQ GLVHISECKN GRIDNLPEEF HIGQPVEAII 
LDIDNYSKKI SLSFRQLSIP KVHANPKPGE NRNIYKHFWT ATRVKAGFKP IAETIEASKS
EALGRIRGNK K