| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1165 |
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| Symbol | |
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| ID | 4415529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | - |
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| Start bp | 1100727 |
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| End bp | 1101161 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639669354 |
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| Product | RNase H-like ribonuclease |
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| Protein accession | YP_810726 |
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| Protein GI | 116491182 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.345189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGCTGC TGGGCTTGGA TGTCGGTTCA AAAACCGTTG GGGTTGCTCA GTCGGATCCT
TTGGGTTGGA CCGCTAGTTC AATCGAAATT ATTCGTATCA ATGAGGCACA GGGCGAATTT
GGTCTAGACC GACTTGGGCA AATTATTTCC GAAAAAAAAG TAAGCGGAAT TGTTATCGGC
TTACCGAAAA ATATGAATAA TACCGAAGGC CCGCGAGTCG AAGCTTCGCG GAATTATGGA
AAAATGGTGT CTGAACGATT CGGCCTCCCG ATTGATTATC AAGATGAGCG TTTGACTAGT
GTCGAAGCCA ATCGGATGTT GATAGAAGAG GCAGATTTGT CACGTGCAAA GCGAAAAAAG
GTTATTGATA GTCTGGCAGC TCAGTTAATA TTGCAAAACT ACCTCGACAA AAAAGGAAGA
CTTACAAATG GCTAA
|
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| Protein sequence | MRLLGLDVGS KTVGVAQSDP LGWTASSIEI IRINEAQGEF GLDRLGQIIS EKKVSGIVIG
LPKNMNNTEG PRVEASRNYG KMVSERFGLP IDYQDERLTS VEANRMLIEE ADLSRAKRKK
VIDSLAAQLI LQNYLDKKGR LTNG
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