Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1090 |
Symbol | |
ID | 4415939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 1020493 |
End bp | 1021032 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639669282 |
Product | hypothetical protein |
Protein accession | YP_810655 |
Protein GI | 116491111 |
COG category | [S] Function unknown |
COG ID | [COG4939] Major membrane immunogen, membrane-anchored lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000187701 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA GTAAGACACT AAAAAGCATC GCTTTAACGA GCGCTGTGTT TATGAGTTTG GGTTCTTTTA CAGTTGCTGC TCCCGCTGTT TTTCCAAATA CTTCGGTTAC GGCCAGCGCA GCAAAAACTG CGAAGCAGAC CGCTGGTAAG AAGCTTAAAA ATGGGACTTA CAAATTGGCA GAGCAGGATT ACTATAATGG ATATCGTGTT GTAATGTCGA TGAAAGTCAA AAACAACAAA ATTGTTTCCA ATAAATATGA TTATGTCAAC AAAAAAGGCA AGTCGAAGAC TGATGACGCA GCCTATGAAA AAGCAATGAA AAAGGCCAAC GGGGTTGGAC CTAAGGAATA TATTCCAAAG TTAAACGAGG AATTAATTAA AGCTTACGGT TCCAAAGAAC CTTCGGCCGT TGTTGACACG GTTTCCGGGG CAACCGAGTC TTCGAATCTT TTCGTTATTT ATGCTCAACA GCTCATCAAT CGTGCTCAAG CGGGCAACCA TAAGACCGTT AAAATTTCTA ATATCATTTA CTCGGATTGA
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Protein sequence | MKTSKTLKSI ALTSAVFMSL GSFTVAAPAV FPNTSVTASA AKTAKQTAGK KLKNGTYKLA EQDYYNGYRV VMSMKVKNNK IVSNKYDYVN KKGKSKTDDA AYEKAMKKAN GVGPKEYIPK LNEELIKAYG SKEPSAVVDT VSGATESSNL FVIYAQQLIN RAQAGNHKTV KISNIIYSD
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