Gene OEOE_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_1079 
Symbol 
ID4415147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp1010416 
End bp1011330 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content40% 
IMG OID639669273 
Productribosomal large subunit pseudouridine synthase D 
Protein accessionYP_810646 
Protein GI116491102 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA AGCAAATTTT AGAAAGTACA ATCGTCAATC AAAGTGGAAG GTTAGACAAA 
ATTTTAGCAA CCGATTTTTC TGCTTTTTCT CGAAATCAGA TCAAAAAATT AATTGATCAG
GATAGAGTGA TTGTCAACGG AAAGCCTGTT CTTGCAAAGT ATCTTGTTCA AGATGGAGAT
CATGTCGTTA TCAAAGTTCC ACCTGTTAAA AAAACCGAAT TGTTGCCTGA AAAAATTCCA
CTCGATATTG TCTATGAAGA CGACGACCTT ATTGTTGTAA ATAAGCCTCA GGGAATGGTC
GTCCATCCGA GTGCCGGCCA TTCGGAACAT ACACTTGTTA ATGCTCTGCT TAGCCATGCC
CCCTTATCGA CCATCAATGG CGAGTTCCGT CCTGGAATTG TCCACCGAAT CGATAAAGAT
ACCAGCGGAT TGTTAATGGT AGCTAAAAAT AATTTTGCTC ATGAACATCT GTCGCTTGAT
TTGAAATCTC ACAAAACGGG ACGAAAATAC TTAGCAATTG TTCATGGGAA TTTTTCTGAG
AAAAGAGGCA CGATTAAAGC ACCAATCGAT CGTGATCCAA AAAATCGTCA AAAGCAGGCC
GTCGTCGCTA ACGGCCGGGA AGCAATAACG CACTTTAAGG TTTTGGAAAG TTTTTCAAAT
TATTCGTTAA TCGAAGCTGT TTTGGAAACC GGTCGTACCC ATCAAATTCG AGTCCATATG
GCTTATATTG GCCATCCGGT CGCTGGCGAT CCTTTATACG GACCCCGAAA AACTTTGCCC
GGCAGGGGAC AGTATCTTTT TGCAAGCAGC TTATCTTTGA CACAGCCGCA TACCGGAAAA
GAATTAAGTT TTAGTGCGCC TTTACCTGAT TATTTTCAAA AAATGCTTTT AAAATTGCGG
AATCTAAATG AGTAA
 
Protein sequence
MKNKQILEST IVNQSGRLDK ILATDFSAFS RNQIKKLIDQ DRVIVNGKPV LAKYLVQDGD 
HVVIKVPPVK KTELLPEKIP LDIVYEDDDL IVVNKPQGMV VHPSAGHSEH TLVNALLSHA
PLSTINGEFR PGIVHRIDKD TSGLLMVAKN NFAHEHLSLD LKSHKTGRKY LAIVHGNFSE
KRGTIKAPID RDPKNRQKQA VVANGREAIT HFKVLESFSN YSLIEAVLET GRTHQIRVHM
AYIGHPVAGD PLYGPRKTLP GRGQYLFASS LSLTQPHTGK ELSFSAPLPD YFQKMLLKLR
NLNE