Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1070 |
Symbol | |
ID | 4415138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 1000768 |
End bp | 1002636 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639669264 |
Product | single-stranded DNA-specific exonuclease |
Protein accession | YP_810637 |
Protein GI | 116491093 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGGATA ATCAATATTT TTGGTTTAAA AGACAGACTG ATAAGCAATT TATCCAGAAA ATCGAACAGC ATTTTTCGCT TGACAGACTG ACGAGTACGG TCCTTGCCGG GCGGTTTTCT TCGGTTCCGC TGATTGAGGA TTTTTTTAGT TCGGATTTGA ATAAATTAGT TGATCCGAGT CGTTTGGACC AGATAGAACT TTTAAAAAAA CGCTTGATTA GCGCAATTGA TAATCAGGAG AAAATCACGA TATACGGCGA TTATGATGCT GACGGGATTA CAAGTACTTC GATTTTATTA AAGACTTTGC AAATACTTGG GGCTCGGGTG GATTATTTTA TTCCGAATCG TTTTCGCGAT GGTTATGGAC CGAATAAGTT TGTTTATCAG CAGCTAATCG ATACGGGAAC AAAATTGATT TTTGCGGTCG ATAATGGCAT TTCCGGTTTT GACGCGGTCG ATTTGGCAAA TCGAAACCAA GTCGATGTCC TGATTGCCGA TCATCATCAG TTGCCGAAAA AATTGCCAAA CGCCAAAGCG ATTATCCATC CTGATTTATC GGATGATTAT CCTTTTAAAA ACTTGTCTGC TGCCGGTATC GCTTTTAAAG TGTCCAAATA TTTGTTGGGA ACTCAAAAGG CGCGCCAATT CTTTCCCTTG GTTGCAATTG GTGAAATTGC CGACGTAATG CCCTTAATCA ATGAAAATAG AATTCTGATT CAAACTGGTA TCGATTTAAT AAAGAGTGGC GAAAATAAGG GCCTTCAGGA AGTGATTAAA AGAGCTGATT TGAAGCTCGA AAGTCTTACA GCCCAGGATA TTGCCTTTAA AATAGCTCCG CGTCTTAATT CTTTGGGAAG AATGGCTGAT GCCGGAATCG GTGTTGAATT GCTTACCACT GATGATTCCG ATAAGGTATC CGAGATTGCC AAGCAGGTTG AACACTTAAA CAAACAGCGG CAAAAAGAAG CCGATAAAAT TTATCGTATT GCCTCAAGGC AGGTTTCTCC TCAAGAAAAT AATATTATTA TTGTTTCTGG TGAAAATTGG CATGAAGGAA TTATCGGAAT CATTGCCGGC CGTTTGTCGG CATATTTTGG CCGTCCGGCG GTTGTTTTCT CGGTCAAAAA CGGTATCGCC AAAGGATCTG CCCGTAGTAC CGGAGATTTT GATCTCTATA AGGTTTTAGA TCGAGCTCGT GATCTTTATA TTTCTTTTGG TGGGCATAAA CAAGCAGCCG GTTTAAGTCT CAAGGCCAGT GATTTGGATC GTTTGGACAA AATATTGAAT GCCGACGACT ACCATTTTTC GGTTGGGAGA CTTGCGATCG ATGCGGTTAT AAAAGCAGAG GATTTATCAA TCGATTCTTT TAAACAATTG TCAAAACTTG CTCCTTTTGG TGAGGGAAAT CCAGAACCGA TTTTTGATTT GGATGATGTC GAATTAGTCA ATTTGCGGAT TTTGGGATCG GATAAGAAAC ATTTCAAGTT AAAAGTAAAT GGTTTTTCGG GTGATATTTT GTTTTTCAAT CGTCCTGATT TAATTGGAAA ACTTCAATTA GGTGAAAGGT TGTCGATTGT TGGAACTCTT TCTCTAAATG AGTGGAAGCA CAGACAGTCT CTGCAAATTA TCGGCAAAGA TATCAGAAGC GAGAATCGAA TTCCCGACCG AAATTCCTTC TCTCGGATTT ATCACTATTA TTGTGCGAAA AATGTTTTAT ACTCTCCAAA TGATTTCTTC CAAAAAGTTT TTTTGGAATT AGGATTTGTT AGAATTGTAA ATGGTGTTGT TTTTGTCGTT CCTGAAGCAA AGCATGCTGA ATTATCTCAA TCGTATACAT ATCGAAAGCG AGCGGAAAAT GGATATTGA
|
Protein sequence | MLDNQYFWFK RQTDKQFIQK IEQHFSLDRL TSTVLAGRFS SVPLIEDFFS SDLNKLVDPS RLDQIELLKK RLISAIDNQE KITIYGDYDA DGITSTSILL KTLQILGARV DYFIPNRFRD GYGPNKFVYQ QLIDTGTKLI FAVDNGISGF DAVDLANRNQ VDVLIADHHQ LPKKLPNAKA IIHPDLSDDY PFKNLSAAGI AFKVSKYLLG TQKARQFFPL VAIGEIADVM PLINENRILI QTGIDLIKSG ENKGLQEVIK RADLKLESLT AQDIAFKIAP RLNSLGRMAD AGIGVELLTT DDSDKVSEIA KQVEHLNKQR QKEADKIYRI ASRQVSPQEN NIIIVSGENW HEGIIGIIAG RLSAYFGRPA VVFSVKNGIA KGSARSTGDF DLYKVLDRAR DLYISFGGHK QAAGLSLKAS DLDRLDKILN ADDYHFSVGR LAIDAVIKAE DLSIDSFKQL SKLAPFGEGN PEPIFDLDDV ELVNLRILGS DKKHFKLKVN GFSGDILFFN RPDLIGKLQL GERLSIVGTL SLNEWKHRQS LQIIGKDIRS ENRIPDRNSF SRIYHYYCAK NVLYSPNDFF QKVFLELGFV RIVNGVVFVV PEAKHAELSQ SYTYRKRAEN GY
|
| |