| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1021 |
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| Symbol | |
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| ID | 4415658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 953729 |
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| End bp | 955738 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639669222 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_810595 |
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| Protein GI | 116491051 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0905515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAACTA AAAAGAAAAA AGCAAAGAAG TTAGTAATTG TAGAAAGTCC GGCTAAAGCC
CGTACAATTG AAAATTATTT GGGAAGGGAT TACGAAGTTT TGGCTTCGAT GGGCCATATT
CGTGATTTGC CAAAATCACA GTTGGGTGTA GATACCGAAC ATAATTACGA ACCAAAATAT
ATCAATATTC GTGGGAAAGC GCCATTAATA AATTCCTTAA AAAAAGCCGC CAAATCAGCC
TCGGCTGTCT ATGTAGCTTC TGATCCGGAT CGAGAGGGTG AAGCGATAGC TTGGCATTTG
GGACATATTC TTGGTTTACC CGATGGTGGA AAAAACCGAG TAACTTTTAA TGAAATAACG
AAACCAGCCG TCAAAGAAGC TTTTAAACAT CCCCGCGGAA TCGAACAGGA CTTGGTAGAT
GCCCAACAGG CACGTCGTGT TTTGGACCGT TTGGTTGGGT ATTCGATTAG TCCGATTTTA
TGGCAAAAAG TCAAAAGGGG ACTATCGGCA GGCCGTGTCC AATCAGTTGC GCTCGGCTTG
ATTCTTGATA AAGAAAAAGA GATAGCCGCT TTTGTTCCAA AGGAATATTG GAGTTTAAAT
GCCAATTTCA AAGCTGGTAA ACATGAGTTT TCAGCCGAAT TTTACGGTAC CGATGGGAAA
AAGGTTAAAT TAGATAATCA AAAATCGGTT TCCAAAATCT TAAAGAGAAT CGATAGCAGC
AAAGATTTTA AGATTACCGA TATTTCTACA AAAGAATCAA AGCGAAATGC TCCCAATCCA
TTTACAACTT CTTCTCTTCA GCAAACAGCC AACTCGCAAT TGAATTATCA TGCGCGAAAA
ACAATGCAGA TAGCTCAGGG ACTTTATGAA GGTATTAGTT TGCCAAAAAT CGGTCACGTT
GGTTTAATCA CCTATATGCG TACCGATTCA ACTCGACTAT CGGAAACAGC TCAAGAAATG
GCCAAAAAAT TCATTGTCGA TAAATTCGGC AAAGAATATT ATCATCGCCA TAATGTTGTT
AAAAAGTCGG AAAATGTTCA GGATGCGCAT GAAGCGATCC GGCCGACAGA TGCCGAAAGA
ACACCGGAAT CGTTAAAAGA AATTCTGACT CGCGATCAAT ATCGTTTATA CAATCTAATC
TGGTCTCGTT TTATCGCCAG CCAGATGTCT GAACAAAAAC TTGAAAATCA ATCTCTGATG
ATTGAACAAA ACAAAACTGT TTGGCGCGCT ACCGGAATTA AGGTTCTTTT CGAAGGATGG
ACAATGGCTT TAAAAACGTC TTCGACAAAA AATAATATTT TGCCGGCACT TAAAATTGGT
GATCTCGTTC AAATGGTGAA TAATCTTCCG GAACAGCATT TTACTCAGCC ACCGGCTCGA
TATACTGAGG CTAGTTTAAT CAAAGCATTG GAAGAACTTG GAGTAGGGCG TCCGTCGACT
TACGCTCCGA CAATGGATAC AATTCAACGC AGAGGATATA TCGGTTTCGA TCAAAAGAAA
ATTGTACCGA CTGATTTGGG AGATATTGTC CAGGATGTTG TTGTTAAATC ATTTCCAGAG
GTAACAGACA AACAATTTAC TTCAAAGATA GAAGACGAAC TGGATAAGGT TGAGACCGGG
AATGTTAAGT GGCAAAAAGT TATTGATGAA TTTTACAAGC CATTCAGCAA AGAGGTTGAT
GCAGCTATAG AAAATCTTGA AAAGGTTCCG ATTTATGATC GAATTGCACC TGAGTTATGC
GATATTTGTG GCAGCTTAAT GGTTATACGT CGTTCGAGAA GAGGAGAATT TTATGCTTGT
TCTCGTTTTC CTGATTGTCA CGGTACAAAA TCAATCGTTG AAGAAATCGG CATGAAATGT
CCAAAATGTG GGATTGGCGA AGTTGTTATC AAACGGACAA AACGGGGACG CATTTTTTAT
GGTTGTTCTC GTTATCCGGA TTGTGATTTT GCAAGTTGGA CCAAACCTAA AAAAAACGAA
GAAACTGAAG AAAACAATGA AACAAAGTAA
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| Protein sequence | MVTKKKKAKK LVIVESPAKA RTIENYLGRD YEVLASMGHI RDLPKSQLGV DTEHNYEPKY
INIRGKAPLI NSLKKAAKSA SAVYVASDPD REGEAIAWHL GHILGLPDGG KNRVTFNEIT
KPAVKEAFKH PRGIEQDLVD AQQARRVLDR LVGYSISPIL WQKVKRGLSA GRVQSVALGL
ILDKEKEIAA FVPKEYWSLN ANFKAGKHEF SAEFYGTDGK KVKLDNQKSV SKILKRIDSS
KDFKITDIST KESKRNAPNP FTTSSLQQTA NSQLNYHARK TMQIAQGLYE GISLPKIGHV
GLITYMRTDS TRLSETAQEM AKKFIVDKFG KEYYHRHNVV KKSENVQDAH EAIRPTDAER
TPESLKEILT RDQYRLYNLI WSRFIASQMS EQKLENQSLM IEQNKTVWRA TGIKVLFEGW
TMALKTSSTK NNILPALKIG DLVQMVNNLP EQHFTQPPAR YTEASLIKAL EELGVGRPST
YAPTMDTIQR RGYIGFDQKK IVPTDLGDIV QDVVVKSFPE VTDKQFTSKI EDELDKVETG
NVKWQKVIDE FYKPFSKEVD AAIENLEKVP IYDRIAPELC DICGSLMVIR RSRRGEFYAC
SRFPDCHGTK SIVEEIGMKC PKCGIGEVVI KRTKRGRIFY GCSRYPDCDF ASWTKPKKNE
ETEENNETK
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