Gene OEOE_0628 details

Gene Information

• Locus tag: OEOE_0628
• Symbol: rplM
• ID: 4416546
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Oenococcus oeni PSU-1
• Kingdom: Bacteria
• Replicon accession: NC_008528
• Strand: +
• Start bp: 591116
• End bp: 591562
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639668848
• Product: 50S ribosomal protein L13
• Protein accession: YP_810235
• Protein GI: 116490691
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0115715
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAGTA CATTTTTAGC AAAACCACAT GAAATTCAAC GCAATTGGTA TATCGTTGAT 
GCTACCGACG TGCCTTTAGG TCGTTTAAGT AGCGTTGTCG CTACCGTTTT GCGCGGAAAG 
AATAAACCAA CTTTTACACC GTCTGTTGAT ACTGGCGACT TTGTTATCGT TATAAACGCC 
GATAAAGTTC AATTGACTGG CAAAAAGGCG ACTGACAAAA CCTATTATCA CCATTCTGGT 
TATCCAGGTG GCTTGAAGGC TCGTAAAGCC GGAACCCTTC GTGAGAAGAA CCCTAAGAAG 
TTGATTGAGT TATCAGTTCA AGGTATGCTT CCAAAAAATA CTTTGGGTCG TGCTCAAGGA 
TTAAAATTAC ATGTTTATGC TAGTGGCGAG GAAGTTGGGC AAAGTGCTCA AAAACCACAG 
GTATTAAATA TCAAGGATTT ACTCTAA 

 

Protein sequence

MRSTFLAKPH EIQRNWYIVD ATDVPLGRLS SVVATVLRGK NKPTFTPSVD TGDFVIVINA 
DKVQLTGKKA TDKTYYHHSG YPGGLKARKA GTLREKNPKK LIELSVQGML PKNTLGRAQG 
LKLHVYASGE EVGQSAQKPQ VLNIKDLL