Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0626 |
Symbol | truA |
ID | 4416544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 589431 |
End bp | 590189 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639668846 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_810233 |
Protein GI | 116490689 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.133889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATT ATAAGGTTAC AATTTCATAT GATGGTCATT ATTTTGAAGG TTTTCAAACG CAAAATAGGC CGGGTAGCAG AACTGTTCAG GATGAATTAA TTAAGGTTGT TTCAAAAATG GCTAAAACGA AAATCAAGGT TATCGGAGCT AGCCGAACGG ATGCCGGCGT TCATGCTAAC GGTCAGGTAA TCAATTTCAT TTTTCCTTTT GATTTAAATG AAAAAGCAAT TTTAATGGGG ATGAATAGTC AATTACCGAC CGATATTCTT GTTAAAAAAG TTGAGAAAGT GCCAATTAAC TTTAATGCTC GACACAGCAG CCATCGGAAA CGTTATTTAT ATCGAGTTTC GACAAGTAAA TTTATCGATC CTTTCAAACG TTTTTATACC GGACATTATT TTTGGAATTT GGATACTAAT AAAATTCAAG AAGCCTTACC TGATTTAATT GGCGAACACG ATTTTTCCAG TTTCGCGGCT TCCGGTAATC AAACAGCCAC TACGATCAGA ACGGTTACAA AAGCGGAGTT GAAGATTTTT CCTAAAAATA ATGAATTATT ATTTACTTTT GAAGGAAACG CCTTTCTTTA TAATCAAATT CGGATTATGG TCGGCGTACT TTTGGAAATT GGCAATGGAA CAAGACCGGT CCATGATATT ATTCGTTTGA TTAAAATTAA AGATCGTCAA CAGGCACGTT TCACAGCTCC AGCATCTGGA CTATACTTAG ACGAGGTTTA CTATGAGTCA ATGGATTAA
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Protein sequence | MQNYKVTISY DGHYFEGFQT QNRPGSRTVQ DELIKVVSKM AKTKIKVIGA SRTDAGVHAN GQVINFIFPF DLNEKAILMG MNSQLPTDIL VKKVEKVPIN FNARHSSHRK RYLYRVSTSK FIDPFKRFYT GHYFWNLDTN KIQEALPDLI GEHDFSSFAA SGNQTATTIR TVTKAELKIF PKNNELLFTF EGNAFLYNQI RIMVGVLLEI GNGTRPVHDI IRLIKIKDRQ QARFTAPASG LYLDEVYYES MD
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