| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0618 |
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| Symbol | rpsM |
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| ID | 4416791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 584732 |
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| End bp | 585103 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639668838 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_810225 |
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| Protein GI | 116490681 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000347 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGTA TTGCAGGTAT TGACTTACCA CGTGACAAAA GGATCGTGAT TGGTCTTACT
TATATATATG GAATCGGTAA TACTACTGCT GAGAAGGTTT TGGCAGAAGC TGGTGTGAGC
GAAGATGTCC GTGTACGTGA CCTTAGTCCT GAAGATGAGG ATAAAGTTCG TGCAGCAGTT
GACAAATTAA ACTTAACACT TGAAGGTGAT TTGCGTCGTG AAGTTAGCTT AAATATTAAG
GGACTTCAGG AAATCGCCTC TTACCGTGGT ATTCGTCACC GTCGTGGATT ACCAGTTCGT
GGACAACACA CGAAGAATAA TGCACGTACT CGTAAAGGCC CAGCTAGAGC GATTGCTGGC
AAGAAGAAAT AA
|
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| Protein sequence | MARIAGIDLP RDKRIVIGLT YIYGIGNTTA EKVLAEAGVS EDVRVRDLSP EDEDKVRAAV
DKLNLTLEGD LRREVSLNIK GLQEIASYRG IRHRRGLPVR GQHTKNNART RKGPARAIAG
KKK
|
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