| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0613 |
|---|
| Symbol | |
|---|
| ID | 4416786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 581843 |
|---|
| End bp | 582307 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639668833 |
|---|
| Product | 50S ribosomal protein L15P |
|---|
| Protein accession | YP_810220 |
|---|
| Protein GI | 116490676 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0200] Ribosomal protein L15 |
|---|
| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0537361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAT CAACTTTAAA ACCAGTCGCT GGTTCTCGTA AATCTTCTAC TCGAAAAGCT
CGCGGTTTCT CTGCCGGCAA AGGAAAGACA GCTGGTCGTG GACAAAAAGG CCAGAAGGCT
CGTGAAGGAA AAAAATTGCG TCTAAGTTTC GAAGGTGGCC AAATGCCATT GATGCGTCGT
ATGCCTAAAC GTGGATTTAA CAATATTTCT CGTAAAGAGT ATGCAATCGT TAATCTTGAC
CAACTTAATA AGTTTGACGA TGGAACAACT GTTTCGGCCT CTTCATTGAA AGAAGCTGGT
ATCATTAAAA AGGAATTATC AGGCGTCAAA GTTTTGGCTT CTGGTAAACT TAATAAAAAA
ATTACTATTC ATGCAGCAAA AGCTTCACAA GCTGCACAGG ATTCAATCAA AGAAGCCGGT
AGCAAGATTA TTTTAACTAC CGAAACTGCT GATTCAGAAA ATTAA
|
|---|
| Protein sequence | MDLSTLKPVA GSRKSSTRKA RGFSAGKGKT AGRGQKGQKA REGKKLRLSF EGGQMPLMRR
MPKRGFNNIS RKEYAIVNLD QLNKFDDGTT VSASSLKEAG IIKKELSGVK VLASGKLNKK
ITIHAAKASQ AAQDSIKEAG SKIILTTETA DSEN
|
|---|
| |