Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0612 |
Symbol | rpmD |
ID | 4416785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 581658 |
End bp | 581843 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639668832 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_810219 |
Protein GI | 116490675 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0237089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATT TAAAAATTAC TTTAATTAAA AGCATAGTTC ATCGTGAGCC TCGTCAACGA GAGATTGCAA AGTCTCTTGG CTTGGGTCGT GTTCACTCTT CTGTTGTTCG CCCAGATAAT GCTGCGACTC GTGGTATCAT TTTTAAGATT GCTCATCTTG TTTCGGTTGA GGAGGTTAAC AAATAA
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Protein sequence | MADLKITLIK SIVHREPRQR EIAKSLGLGR VHSSVVRPDN AATRGIIFKI AHLVSVEEVN K
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