Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0493 |
Symbol | |
ID | 4416768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 481127 |
End bp | 482710 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639668723 |
Product | polysaccharide transporter |
Protein accession | YP_810112 |
Protein GI | 116490568 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGATTTA AAAAAAATAT AATAACAGGC GAATTAGCAA AAGGTACGTC TTGGCTAACC CTGGGCAACG TTGTTTCGCG GCTTTTGGGA GCTATTTATG TGATTCCGTG GACCTTGATG CTGGGCATTT TATCCTTGCA GGCCAACACT TTATTTGGTA AAGGATATAA TGTTTATCAA CTATTTTTAA TGATGTCGAC AGTTGGACTG CCATCTGCGG TGGCTAAGTA TACCTCTGTC TTGGTTGGCA AGGAAAAAGA TCTGTTTTTA GAGAAAGCTT TTCAACTAAG TCTTTTCAGC GGCCTGCTCT TCGGAGTTAT TTTCTGGATC CTGGCTCCAA TTTTGGCCGT CGGAGACATC AATCTTATTC CAGTTCTTCA TTCACTCGTT CCTGCCGTTA TTATTTTCCC TTTCCTTTCC GTATTGCGTG GAAAATTTCA AGGACAATTG GATATGGAAA TCTTAGCCAA ATCCGATATA ATCGAACAAT TAATCAGGAT TGTTTATATG CTGCTTTCGG CTTTTTCTAT TCTGGATATA TTCCACGGCA ATTGGGTGAA TGTTGTAATT CAGTCAACTT TCGCCGCTTT TATAGGTGCC TTGGCAGCTA TTATATATCT TCTTTATAAA CTTTATTTCT CAAGATCCGA ACAGATTCAT TTATTCTCAA AAAGTAAATT AAGCAAAAAC AGTTCTTTTG CAAACAGCTT TAAATCATTT CTTCCAATCG TTAAACAATC GATCCCCTTT GTTTTTATTG GTGGATTTTT GACCTTTTAT CAATGGATAG ATCAATACAC ATTCTTCCCT TTAATGAGAA TCTTTTATCC TGATTTCCCC CAAATACAAT TAGAAGATAT CTTTGGCAGA TTTAATTTCA ATGCCAACAA ATTGATTATG TTGATAGTTT CCCTGGCCAT GTCAGTTGCT TCAACGATTT TACCAATTAT TTCCAAAAAC TCTTCTAATT TAAAAGAGAC AAGAAATTCG ATTGCCCGGG GAATTAAAAT GTTAATCGCG ATTATTTCTC CTTCAGCCTT AATTATGTAT GCTCTTGCCA AACCGATTTA TATTATTTTT TATGGCAAGT ACGGCTCCCT ACAGGATTTT GTTCCGATTG TTCAGGTCTC GGCGTTATTA TCTGTATTCA TGAGCAGTGC CATGCTGCTG GCGATGATTT TGCAAGGAAT TGGCAAAACA CGTGTCGTTA TCAAAGCAAT AATTTATGGA ATTATTTTTA AAATATTATT TCAACCATTT TTGATCATAG CATTTCCGAT GCTAGGTGCC ATGATGGCAA CCTTTGTTGG CTTAATAGTT AGTACCGTGA CAATGTTTGT CTTTATAGAA ATAAACTATC ATGTTTCTCA AGATGTCGAA GCGGGTTTTC TCTGCAGCAC CTTTGTTTCA TCGATAATAA TGTTTGCATT AGTCTGCATA TCGGATTATT TTATCCAGCT GTTTGTTTCG GATTCAAGAA TCGGTCAATT TTTACCCTGT TTAATATCAT CCTTGATTGG ACTTTTTATC ATTATTAAAT GTTACAAAAC GAATGGTATT TTAGATGAAA TTCTAACAAA ATAA
|
Protein sequence | MRFKKNIITG ELAKGTSWLT LGNVVSRLLG AIYVIPWTLM LGILSLQANT LFGKGYNVYQ LFLMMSTVGL PSAVAKYTSV LVGKEKDLFL EKAFQLSLFS GLLFGVIFWI LAPILAVGDI NLIPVLHSLV PAVIIFPFLS VLRGKFQGQL DMEILAKSDI IEQLIRIVYM LLSAFSILDI FHGNWVNVVI QSTFAAFIGA LAAIIYLLYK LYFSRSEQIH LFSKSKLSKN SSFANSFKSF LPIVKQSIPF VFIGGFLTFY QWIDQYTFFP LMRIFYPDFP QIQLEDIFGR FNFNANKLIM LIVSLAMSVA STILPIISKN SSNLKETRNS IARGIKMLIA IISPSALIMY ALAKPIYIIF YGKYGSLQDF VPIVQVSALL SVFMSSAMLL AMILQGIGKT RVVIKAIIYG IIFKILFQPF LIIAFPMLGA MMATFVGLIV STVTMFVFIE INYHVSQDVE AGFLCSTFVS SIIMFALVCI SDYFIQLFVS DSRIGQFLPC LISSLIGLFI IIKCYKTNGI LDEILTK
|
| |