Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0388 |
Symbol | |
ID | 4416470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 378039 |
End bp | 379490 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639668625 |
Product | amino acid transporter |
Protein accession | YP_810018 |
Protein GI | 116490474 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000257428 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGTA TTTTTCAGAA AATGTTCCGT AAAGAGGATC CGCTTGTCTA TCAGGATAAA GATTCGCATC TAATTAGAAG TCTTACTACG AAGGACTTCC TAGCGTTGGG CGTTGGAACA ATTGTCTCCA CATCAATTTT TACTTTACCG GGGGTCGTCG CAGCCCAACA CGCCGGCCCG GCAGTTTCCC TTTCCTTTTT ATGTGCAGCA ATTGTCGCCG GCATAGTTGC TTTTGCCTAC GCTGAAATGG CCGCCGCAAT GCCCTTTGCG GGTTCGGCTT ATTCATGGAT TAACGTAGTT TTTGGCGAGT TCTGGGGCTG GATTGCCGGT TGGGCATTGC TGGCCGAATA CTTCATTGCC GTAGCATTCG TTGCATCCGG ACTATCTGCA AACTTTCAGG GCTTGATTTC GCCATTAGGC TTCAAACTGC CTACAACTTT ATCAACCGCT TCAACAGGAT CCAACGGCGG CTTAATGGAT TTATTTGCGA TTATTATCAT TCTATTGGTA GCTACTTTGC TTTCTCGCGG CGCATCGCAA ACCGCCCGTG TCGAAAACAC GCTCGTTATT TTGAAGGTTA TTGCTATTTT AGTATTTATT TTTGTCGGTG TGACAGCAAT TAAAGGTCAG AATTATGTAC CGTTTATTCC AAAATATCAT GCCAATACAG ACGGCTCGGC ATTCGGTGGT TGGCAAGGAA TTTATGCCGG CGTCTCAGAA ATTTTCCTGG CATACATTGG TTTCGACTCA ATTGCCGCGA ATTCCGCAGA AGCTAAGAAT CCACAAAAAA CGATGCCCCG TGGAATTCTA GGATCTTTAT TTATAGCTGT TTTTCTTTTC ATTTCCGTTG CTCTGGTTTT GGTCGGTATG TTCCGTTATT CGGATTATGC AAACAATGCT GAACCGGTAG GCTGGGCTCT TCGTCAAAGC GGCCACGAAA TCATCGCAAC CATTGTTCAA GCCGTCGCAG TTATTGGTAT GTTTACAGCC CTTATCGGAA TGATGCTTGC CGGTTCTCGA CTTCTTTATT CATTTGGTCG TGACGGTTTG CTTCCGAAAA CATTGGGCAA ATTGAGCAAT AATCTGCCCA GCCACGCTTT AATCGTACTG ACAGTTATTG GTATTGCCTT GGGTGCATTC TTTCCTTTCA CTTTTTTGGC TCAATTAATT TCTGCTGGAA CATTAATCGC TTTTATGTTC GTTTCAATTG GAATTTATGC GCTTCGTCCC CGCGAAGGAA AAGATATTCC GGAACCAAGT TTCAAAATGC CTTTTTATCC AGTATTACCC GCACTTGGAT TTTTAGGTGC TCTGGCTATT TTTTGGGGTC TTGATATCCA AGCGAAGATT TATGCCCTTG GTTGGTTTAT CTTTGGCATG ATTGTCTATT TCGGCTACTG GATAAAACAT TCCACCGCAG GCAGTAGCAA AAAAACAGAA AAATCAAATT AA
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Protein sequence | MSSIFQKMFR KEDPLVYQDK DSHLIRSLTT KDFLALGVGT IVSTSIFTLP GVVAAQHAGP AVSLSFLCAA IVAGIVAFAY AEMAAAMPFA GSAYSWINVV FGEFWGWIAG WALLAEYFIA VAFVASGLSA NFQGLISPLG FKLPTTLSTA STGSNGGLMD LFAIIIILLV ATLLSRGASQ TARVENTLVI LKVIAILVFI FVGVTAIKGQ NYVPFIPKYH ANTDGSAFGG WQGIYAGVSE IFLAYIGFDS IAANSAEAKN PQKTMPRGIL GSLFIAVFLF ISVALVLVGM FRYSDYANNA EPVGWALRQS GHEIIATIVQ AVAVIGMFTA LIGMMLAGSR LLYSFGRDGL LPKTLGKLSN NLPSHALIVL TVIGIALGAF FPFTFLAQLI SAGTLIAFMF VSIGIYALRP REGKDIPEPS FKMPFYPVLP ALGFLGALAI FWGLDIQAKI YALGWFIFGM IVYFGYWIKH STAGSSKKTE KSN
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