| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0343 |
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| Symbol | |
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| ID | 4416286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 333774 |
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| End bp | 335075 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639668588 |
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| Product | cellobiose-specific PTS system IIC component |
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| Protein accession | YP_809981 |
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| Protein GI | 116490437 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000855206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAA AGAAACCAAA CAGTTTTATC ACCGACAAGG TTATTCCACT CGCTGGTAAA
CTTGCTTCTT CTCGTCATTT GATTGCATTG CGTGATGGTA TGACATTAGC TGTTCCTATG
ATCATCATTG GATCAGTCTT CATGATTATC GCACAATTTC CAATTCAAGC CTATTTGGAC
TTTATGGCTA GTGTCTTTGG TAAGAATTGG GCAACCGTTT TACAATATCC AACTAACGCA
TCGTTCCATA TTATGGGTCT GATTGCTGTT ATTGGTATTT CTTATAATTT GGCAAAGAGT
TATAAGGTCG ATCCAATCTC TGCTTCAATC GTTTCAACGG GTGCTTTCGT ACTTACTATT
CCTTTGAAGA CAGATAAAGC TGGCGCATTG TGGATTCCAT TGACACAATT TGATTCAGCT
GGTTTATTTA CAGCTATTAT TGTTGGTTTA TTCATTACCG ACTTTTATGT ATGGATGGTT
CACAAGAACT GGACAATTAA GATGCCTGAT ACAGTTCCAC CTGCAGTAAG TAACTCATTT
GCTGCTTTGT TCCCAGGTTT CATTGTTTTG GCTCTTGTTT GGGTAATTCG TTTAGGTGTT
GAAGCAACAC CAATGCAAAG TATTCCAAAT ATCATCTCAT TCTTCTTGGC AACACCACTA
AGTCACTTGA ATAACACATT ACCTGGTGCT CTAGTAGCCG AACTCCTAAT TTCCTTCCTA
TGGATCTTCG GTATTCATGG TGCTAACGTT GTTTCTGGTG TTATGATGCC TATCTGGTTA
ACAGCTTTGA ACCAAAACCA CGCAGCATTC ACTGCTGGTA AAGCTCTACC AAATATTGTT
ACAACATCAT TCTTCGATAA CTTCGTTCAC ATGGGTGGTT CTGGTGCCAC AATCGGTTTG
GCTATGTTGT TAGCCTTCGC CGCAAAGAGT AAGGAACTTA AGACTTTAGG TAAGTTGGTT
GCTGGACCTG CTTTGTTCAA TATTAACGAA CCTATTATCT TCGGTCTACC AATTGTTATG
AACTACAAGA TGTTAGTTCC ATTTATTGTT ACACCTTTGA TTAACGTAAC AACAACATAT
ATTGGTATGG CTACTAACTT GGTTGCAAGA CCAATGGGTG TTTACATTCC TTGGACAACT
CCACCAATCC TATCAGGATT CATTGCAACT GGACATATTT CTGGTTCTGT AATGCAAATT
ATCAATATCG TTCTTGATAC TTTGATGTAC TTCTACTTCT TCAAGTCAAT GGATAAAGAA
AAGTTGGCTG AAGAATTAGA TCCAAAGAAC GCTGAAGCTT AA
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| Protein sequence | MAEKKPNSFI TDKVIPLAGK LASSRHLIAL RDGMTLAVPM IIIGSVFMII AQFPIQAYLD
FMASVFGKNW ATVLQYPTNA SFHIMGLIAV IGISYNLAKS YKVDPISASI VSTGAFVLTI
PLKTDKAGAL WIPLTQFDSA GLFTAIIVGL FITDFYVWMV HKNWTIKMPD TVPPAVSNSF
AALFPGFIVL ALVWVIRLGV EATPMQSIPN IISFFLATPL SHLNNTLPGA LVAELLISFL
WIFGIHGANV VSGVMMPIWL TALNQNHAAF TAGKALPNIV TTSFFDNFVH MGGSGATIGL
AMLLAFAAKS KELKTLGKLV AGPALFNINE PIIFGLPIVM NYKMLVPFIV TPLINVTTTY
IGMATNLVAR PMGVYIPWTT PPILSGFIAT GHISGSVMQI INIVLDTLMY FYFFKSMDKE
KLAEELDPKN AEA
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