Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0153 |
Symbol | |
ID | 4415828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 142059 |
End bp | 142559 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639668416 |
Product | shikimate kinase |
Protein accession | YP_809811 |
Protein GI | 116490267 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAT TAATTTTAAT TGGTTTTATG GGAAGCGGGA AAACAACAAT TGGTCGTTTG CTTGCTGAAA AACTTGCTAT TCCTCAGTTG GATTTGGATG CTCTGATCGT CCAAGAAAAC AAGCAGTCGA TTAATGATAT TTTCACAGAA GTTGGTGAAG AGCATTTTCG AAAAATGGAA ACAGTTGCTT TGAAAAAAGC GATCAATCAA AACGTTGTTT TATCAACCGG TGGAGGTGCG CCGATTAAAA AGTTGAATCA AACTATTTTA AAATCAGTTG ATGCACCAAT TGTTTTTTTG AATGCAGAGT TTAAGACAAT TGAAAAAAGA ATTAATCGTG ACGCCAGTTG GCCCTTGCTT AAAAGAATTG CGGAGCTTAA GCAACGTTAT ATAAAACAGA ACTTTATCTA CCGGGACTTG GCCGATATTG AAATTACTAC CGATCGAAAA AGCCCGGATT TGATAGTTGA AGCCATTCTA GAAAAATACG ATGAAATCTG A
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Protein sequence | MAKLILIGFM GSGKTTIGRL LAEKLAIPQL DLDALIVQEN KQSINDIFTE VGEEHFRKME TVALKKAINQ NVVLSTGGGA PIKKLNQTIL KSVDAPIVFL NAEFKTIEKR INRDASWPLL KRIAELKQRY IKQNFIYRDL ADIEITTDRK SPDLIVEAIL EKYDEI
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