Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0049 |
Symbol | |
ID | 4416217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 45914 |
End bp | 47101 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639668322 |
Product | arabinose efflux permease |
Protein accession | YP_809718 |
Protein GI | 116490174 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTT TTAAATTGCA AAGTATGGTT TTAATTGCCA TTGCTTTTGT TCTTGGCTGC AGCGAATACA TTATTGTCGG TATTCTGGAC AATTTGGCCA AGCAATTTCA AATTGGAATT AGTCAGGTGG GTTATCTGGT CACAGGCTTC GCTTTAGTCT ACGCCATTAG CACGCCTTTA ATCACACTGG CAATTGGTAA AAAAAGTCTT TATAAGGCTC TTTTGATTTT GTTATCGATT TTTATCGTCG GAAACTTGCT GACAGCCGTT GCCAATAGCT ACATAATTCT GGCCGTCTCT CGACTTATAA CGGCAACCAG TTCCGGGGCC TGTATCGCTG TTGCTTTGGC TTTTGCCAAC TTTATTGCAC CAATTAAAAA GAGAGGTTGG CTAGTTTCGT GGGTCTTTTC CGGTTTTAGC ATCGCTTCGG TTTTCGGAGT CCCTTTTGGA ACCTGGATCA GTAAAAATTA TGGTTGGCGA TATTCTTTTT ATGCAATTAT CTTAGTCAGC ATTATTATTC TATTCTTTTC GATTCTGCTT CTTCCTAAAA ATATTCATCA ACAGGCCAGC AAAAACTTCA AAGAACAACT ACGAATTTTT GGTGACAGGA GAATTCAGAT TGGCATGTTT TTACCAATGT TCAATTTAGC GGGAATTTAT GTTTTCTATA CTTACCTGCA ACCGATTCTT TCTCATATCT TACTTGTTAA AGAAAATTTT TTAACATTAA CATTATTTTT GTATGGCCTC ATGGCATTAA TTAGTAATCA ACTAAGCGGA AAAATTTCAA GTAGTTCCGG TCTGAAAAAA ATGCCGGAAA TATACATAGG TCAATTCCTG TTACTAGTAC TGTTTCCTTT TCTAGCAGTC GTTCCCTTTA TTGGAATGAT TGTTGTTATG CTTTTAGGAG TTAGTATGTA TCTGCTAAAT TCACCAATCC AAATCTTTTT TCTAACGGTT GCTGAAGCCG ATTACCCGCA ATCTTTGATA TTAGCCTCAT CGCTTAATTC CATTTTTGCT AATTTCGGGA TTGCTTTAGG ATCGGCTACC GGTGGAATTG TAACTGAATA CTTCAGTTTA AATAAAATCG CACCTATTGG GTCGCTTTAC GTTCTAATTG CTCTGGTTTT GACACTAATT CTCGAACGAA TCGGAAAACT GTCAACCCAT AAATTTAATA TGATATAA
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Protein sequence | MKLFKLQSMV LIAIAFVLGC SEYIIVGILD NLAKQFQIGI SQVGYLVTGF ALVYAISTPL ITLAIGKKSL YKALLILLSI FIVGNLLTAV ANSYIILAVS RLITATSSGA CIAVALAFAN FIAPIKKRGW LVSWVFSGFS IASVFGVPFG TWISKNYGWR YSFYAIILVS IIILFFSILL LPKNIHQQAS KNFKEQLRIF GDRRIQIGMF LPMFNLAGIY VFYTYLQPIL SHILLVKENF LTLTLFLYGL MALISNQLSG KISSSSGLKK MPEIYIGQFL LLVLFPFLAV VPFIGMIVVM LLGVSMYLLN SPIQIFFLTV AEADYPQSLI LASSLNSIFA NFGIALGSAT GGIVTEYFSL NKIAPIGSLY VLIALVLTLI LERIGKLSTH KFNMI
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