Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0005 |
Symbol | |
ID | 4415397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 4101 |
End bp | 6059 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639668279 |
Product | DNA gyrase subunit B |
Protein accession | YP_809655 |
Protein GI | 116490131 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.986745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGATT TAAAAAAAAA TAATCAAGTA GCTCCTAGTG ACAATAACTC TTATGGTGGG TCTTCCATCC AAATTTTGGA GGGACTTGAA GCGGTTCGCA AACGACCGGG AATGTATATT GGTTCGACTG CAAGTTCCGG TTTGCATCAT TTGGTTTGGG AAATTATCGA TAATGGAATC GATGAAGCAC TGGCTGGTTT TGCCCATCAT GTTACTTTGA CGATTGAAAA AGATAATTCG ATTACGATTA CCGATGATGG CCGTGGTGTT CCGGTCGAAA TTCAGCCTAA AACCGGGCGT CCGGCTATGG AAGCTGTTTT TACGATTCTG CATGCCGGTG GTAAATTCGA TTCGAAAAGT TATAAAGTTT CCGGTGGGCT TCATGGTGTT GGCGCTTCGG TTGTTAATGC TTTGTCAAAG GAAATGGACG TCAGAGTCTA TCGGGACAAC AAAATCTATT ACATGGATTT TGAACGCGGC CACATTAAGA CAGAAATGAA ATTGCTCGAT GAACCAATGC GCCTTAAACG CGGCACAATT GTTCACTTTG CTCCGGACCC GGATATTTTC CGGGAAACAA TCGTGTTTGA TTATCGAACC CTTGCAAGCC GAATTCGCGA ATTGGCTTTT TTGAATAAAG GGCTGCGTCT TTCTACAACC GATAAAAGAG TTGATCCTGT AAAAAATGAA TCATTTATGT ATGAGGGTGG AATTGCCGAG TACGTCAAAT TTTTAAATAA AAACAAGCAA CCGCTTTTTC CTGAACCGGT TTATGTCGAA GGGGAAGAAA ACGGTATTCA AGTTGAGGTC GCTTTGCAGT ATACCGATGC CGTCGCCGAA ACCCTGATGA GTTTTACTAA TAATATCCAT ACTCATGAAG GTGGTACGCA CGAGACCGGT TTTAAAATGG CTTTGACAAG AATTATTAAT GATTATGCCA AGAAAAAAGG TATTTTGAAA GATTCCGATG ATCCGCTGAG TGGTGAGGAT GTCCGAGAAG GAATTACGGC AATTGTTTCA ATCAAACATC CCGATCCGCA ATTTGAAGGG CAGACAAAAA CCAAGTTGGG CAATACAGAT GCCCAGCAGG TTGTAAATCA TCAGTTCTCA ACGATTTTTA ATCGTTTTAT GATGGAGAAC CCGGAAACTG CCAGAGCGAT CGCTAACAAA GGATTAATCG CTTCTAAAGC ACGTGCCGCT GCCAAGAAAG CACGTGATTT GACGCGTAAA AAGTCCGGAC TGGAAATTAG TGCTTTAGCT GGAAAATTAG CAGATAATAC TTCCCGCGAC CCAGAGATTT CCGAATTGTT TATCGTCGAG GGGGATTCAG CCGGCGGTTC CGCCAAGCAA GGCCGTTCTC GTTTGACACA GGCTATTTTA CCGATTCGTG GAAAAATTTT GAATGTTGAA AAAGCTACTT TGGATAAGGT CCTGGCTAAC GAAGAAATCA GGTCTTTATT TACGGCGATG GGAACCGGTT TTGGCGAAGA ATTCGATATT AGCAAGGCTC ATTATCACAA GGTAATTATT ATGACTGATG CCGATGTCGA TGGAGCGCAT ATCAGAACCC TGCTTTTAAC TTTGTTCTTT AGATATATGC GTCCTTTGAT TGACGCCGGC TATATTTATA TTGCTCAACC ACCTTTGTAT GGAGTCGCGA TCGGAAATTC GGATCAGCGT GTGTACCTTG ATTCCGATGA GGAACTTGAT CAATATACTG CTACACTGCC GGCAAGTCCT AAACCACGGA TTCAGCGATA CAAGGGTCTT GGTGAAATGG ATGCCGTTCA GCTTTGGGAT ACAACTATGG ATCCAAAACA TCGTCGTCTC TTGCGTGTCG ATCCGGAATA TCAACCGGAA GTCGATACAA CTTTCGACAT GCTGATGGGT GACCGGGTTG AACCAAGACG TGAATTTATC GAAGATAATG CTCAATTTGT TGAAGATTTG GATGTGTGA
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Protein sequence | MVDLKKNNQV APSDNNSYGG SSIQILEGLE AVRKRPGMYI GSTASSGLHH LVWEIIDNGI DEALAGFAHH VTLTIEKDNS ITITDDGRGV PVEIQPKTGR PAMEAVFTIL HAGGKFDSKS YKVSGGLHGV GASVVNALSK EMDVRVYRDN KIYYMDFERG HIKTEMKLLD EPMRLKRGTI VHFAPDPDIF RETIVFDYRT LASRIRELAF LNKGLRLSTT DKRVDPVKNE SFMYEGGIAE YVKFLNKNKQ PLFPEPVYVE GEENGIQVEV ALQYTDAVAE TLMSFTNNIH THEGGTHETG FKMALTRIIN DYAKKKGILK DSDDPLSGED VREGITAIVS IKHPDPQFEG QTKTKLGNTD AQQVVNHQFS TIFNRFMMEN PETARAIANK GLIASKARAA AKKARDLTRK KSGLEISALA GKLADNTSRD PEISELFIVE GDSAGGSAKQ GRSRLTQAIL PIRGKILNVE KATLDKVLAN EEIRSLFTAM GTGFGEEFDI SKAHYHKVII MTDADVDGAH IRTLLLTLFF RYMRPLIDAG YIYIAQPPLY GVAIGNSDQR VYLDSDEELD QYTATLPASP KPRIQRYKGL GEMDAVQLWD TTMDPKHRRL LRVDPEYQPE VDTTFDMLMG DRVEPRREFI EDNAQFVEDL DV
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