Gene OEOE_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_0002 
Symbol 
ID4415361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp1528 
End bp2652 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content38% 
IMG OID639668276 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_809649 
Protein GI116490128 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.74529e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT CTGTTAAACG AAACGAACTA ACAAATAAAT TAAATATTGT AAGTAGGGCA 
ATTTCTGGAA AGGTAATTAT TCCAATCCTG ACCGGTATTA AAATTTCTGT TTCCAATAAC
GAAATGACTT TGATCGGGTC TAATTCGGAA ATATCAATCA AGACAGTTTT AACTGCAGAT
AAAGATAAAA AAAATTTGGT AATCGAAGAG CCCGGAGAAA TTATTGCCAA TGCTAATTTC
TTTAGTAATA TCATCAAACA TCTTTCCAGC GACAAAGTAG AAATATCGAC TGAGGGATCG
CAAATTGCAA TTGTTGGTGG AAGCTCTGAT TTTACAGTTG CAGGACAATC AGCTGATAAT
TATCCGCAAC TACCCAGACT CGATGATGCA AATACGATTA ATATTCCATC TTCTGAATTA
ATCGATATTA TTGGCGAGAC AATTAGAGCT GTTTCGATTC AAGATTCAAG ACCCTTATTA
ACAGGAATTC ACTTTACAAT CGGCGACAAT CAAATAAAGG CTGTTTCCAC TGATTCACAC
CGCTTATCTC AAAGAATCAC CAAAATAGGA AATGACAGTC AGGCAGATGT CGTCGTTCCC
AGCAAGGCTT TAATAGAATT ACGTGCTTTG CTTGAAAATA TTGATAATTT GAATTTACAG
TTTGATCGTT CCCAGTTACT GGTTGATTTG GGAGAAACAA CTTTTTACTC CCGTTTGCTG
GAAGGACAGT ATCCAGCAAC GGATCGATTG ATTCCGTCTG ATTCGACAAC TAGTTTCACG
ATTGATGCTG CTCAGCTTGC TCCTTCTTTG GACAGAGCCA GTTTGGTTGC CCACCAATCA
GGCAATATTG TCGCTGAATT CTCGATCAGT CAGGATAAGT TAGTATTATC GACGGCTCAA
AGCGAGGTTG GCAAAGTCCT GGAAGAATTG TCGATCGATA ATTTTAAAGG CGAAGATTTA
AAGATTAGTT TTAATCCCGA TTTTGTTCGC GATGCATTGA GTTCAATCGG TGAAAGCAAA
TTGGATTTTT CATTTACAAC AAATTTGCGT CCTTTCGTCA TTAGACCCAA TGGCGCCTCT
GATAATAATA AGGTTCAATT AATTACACCG GTGCGCACGT TCTAA
 
Protein sequence
MKFSVKRNEL TNKLNIVSRA ISGKVIIPIL TGIKISVSNN EMTLIGSNSE ISIKTVLTAD 
KDKKNLVIEE PGEIIANANF FSNIIKHLSS DKVEISTEGS QIAIVGGSSD FTVAGQSADN
YPQLPRLDDA NTINIPSSEL IDIIGETIRA VSIQDSRPLL TGIHFTIGDN QIKAVSTDSH
RLSQRITKIG NDSQADVVVP SKALIELRAL LENIDNLNLQ FDRSQLLVDL GETTFYSRLL
EGQYPATDRL IPSDSTTSFT IDAAQLAPSL DRASLVAHQS GNIVAEFSIS QDKLVLSTAQ
SEVGKVLEEL SIDNFKGEDL KISFNPDFVR DALSSIGESK LDFSFTTNLR PFVIRPNGAS
DNNKVQLITP VRTF