| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2414 |
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| Symbol | |
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| ID | 4433020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 2242402 |
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| End bp | 2243274 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639668088 |
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| Product | pseudouridylate synthase, 23S RNA-specific |
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| Protein accession | YP_811973 |
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| Protein GI | 116513066 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTA ACTTCATTTT ACCCGAAAAT TTTATCCCAC AAGTTCTTTC AGATTTACTT
GAAAAAACTT GGCTCGTCCC GCGTAAACAA AGACATTTTT TACGAATGAA AAAACATGCT
TTAGTCAATG ATCAAATAAT CGATGAAAAT CAACTCCTTC ATGCTGGAGA TAAGGTGACT
CTTATTTTTG ATAAAGAAGA TTTTTCAAAT TTGTCATTAA AATTTGGCTC AGCCTCCTTA
GCAGATATTC TCTATGAGGA TGAACATTTG ATTGTAGTCA ATAAACCTGA AGGAATGAAA
ACTCACGGAA ATACAGCTGA TGAAATTGCT TTACAAAATC ATGTTGAAGC AGCAATTAAT
CAAAATGTTT TTGTGGTTCA TCGACTTGAC CAGGCAACTT CTGGAGCTGT TTTATTTGCC
AAAAATCAAT TCGTACTGCC AATTCTTGGA AAAATGTTTG AAGAAAATAA AATTCATCGT
GAATATTTAG CTCTTGTTGC TGGTCATTTC TTAGAAGAAA CCTTTACCAT CAACCAAGCC
ATTGGACAAA ATCGTCATGA AAAGAATAAA CGAATCATTT CTAAACATGG GCAAAAAGCA
ATCACACATG TTCAACTTAT ACAAAATTTT ACTGACAAAA GTTTAGTTAA ATGTATTTTG
GATACAGGAC GAACACATCA AATTCGTGTT CATTTATCCT CTTTAGCTCA TCCTATCATT
GGAGATGCAT TATATGGGCA AAAAAGCACC TTACGCTTGA TGCTACATGC TGAAAGCATC
ATTATCCCCC ATCCCTTCAC TAATCAACTT TTAAACATTT CGGCACCGAG CCCTAGCTTT
TCAAACATTC TAAATAAAAT AAAAAAGAAG TAA
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| Protein sequence | MEFNFILPEN FIPQVLSDLL EKTWLVPRKQ RHFLRMKKHA LVNDQIIDEN QLLHAGDKVT
LIFDKEDFSN LSLKFGSASL ADILYEDEHL IVVNKPEGMK THGNTADEIA LQNHVEAAIN
QNVFVVHRLD QATSGAVLFA KNQFVLPILG KMFEENKIHR EYLALVAGHF LEETFTINQA
IGQNRHEKNK RIISKHGQKA ITHVQLIQNF TDKSLVKCIL DTGRTHQIRV HLSSLAHPII
GDALYGQKST LRLMLHAESI IIPHPFTNQL LNISAPSPSF SNILNKIKKK
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