Gene LACR_2386 details

Gene Information

• Locus tag: LACR_2386
• Symbol: rplF
• ID: 4433742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: -
• Start bp: 2222405
• End bp: 2222941
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 639668060
• Product: 50S ribosomal protein L6
• Protein accession: YP_811945
• Protein GI: 116513038
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00107371
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGTA TTGGTAACAA AGTCATCGTT ATCCCTGCAG GCGTAACTGT AGAAGTAAAC 
GGTGCAACTG TCACTGTCAA AGGACCTAAA GGTGAACTCG TTCGTTCATT CAACGAAAAC 
ATCACACTTG AAATTGCTGA AAACGAAATC ACTGTAAAAC GTCCAAACGA CACTAAAGAA 
ATGAAAATGC TCCACGGAAC TACTCGTGCC CTTCTTGCTA ACATGGTAGA AGGTGTTTCA 
AATGGTTTCT CTAAAGCACT TGAAATGATC GGGGTTGGGT ACCGCGCACA ATTACAAGGA 
ACTAAACTTG TATTGTCTGT TGGTAAATCT CACCAAGACG AAGTTGAAGC ACCTGAAAAC 
ATTAAGTTTG TTGTTGCAAC TCCAACTTCT ATCGTCGTTG AAGGTATCAG CAAAGAAGCT 
GTTGGTCAAA CAGCAGCTTA CATCCGTAGC CGTCGTTCTC CAGAACCTTA TAAAGGTAAA 
GGGATCCGTT ACGTTGGTGA ATACGTTCGT CGTAAAGAAG GTAAAACTGG TAAATAA 

 

Protein sequence

MSRIGNKVIV IPAGVTVEVN GATVTVKGPK GELVRSFNEN ITLEIAENEI TVKRPNDTKE 
MKMLHGTTRA LLANMVEGVS NGFSKALEMI GVGYRAQLQG TKLVLSVGKS HQDEVEAPEN 
IKFVVATPTS IVVEGISKEA VGQTAAYIRS RRSPEPYKGK GIRYVGEYVR RKEGKTGK