| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2283 |
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| Symbol | rplA |
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| ID | 4433279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 2134624 |
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| End bp | 2135313 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639667966 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_811852 |
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| Protein GI | 116512945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00159003 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAA AAAGTAAAGC ATTGCGCGCA GCGATTGAAA AAATCGACGC AACTAAAGCA
TACAGCGTAG AAGAAGCTGT AGCACTTGCA AAAGAAACTT CATTTGCAAA ATTTGACGCA
ACTGTAGAAG TTGCTTACAA CCTTAACATC GACGTTAAAA AATCTGACCA ACAAATCCGT
GGAGCAATGG TATTGCCAAA CGGTACTGGT AAAACTGCTC GTGTTCTTGT TTTCGCTAAA
GGTGCGAAAG CTGAAGAAGC TACAGCAGCT GGTGCAGATT TCGTAGGTTC TGACGAACTC
GTTGCTAAAA TCAACGGTGG TTGGTTAGAC TTCGACGTTG TTATTGCAAC ACCTGACATG
ATGGCAGTTG TTGGACGTCT TGGACGTGTC CTTGGACCAC GTAACTTGAT GCCTAACCCT
AAAACTGGTA CAGTTACTAT GGATGTAACT AAAGCAGTTG GTGAATCAAA AGCTGGTAAA
GTTAACTACC GTGCTGACAA AGCTGGTAAC GTTCATGTTC CAATCGGTAA AGTTTCATTC
GACACAGAAA AACTTGTTGA AAACTTTAAA GCTTTGAACA CTGTAATCGC TGCTGCTAAA
CCTGCTGCAT CTAAAGGTGC TTACATCACA AACCTTTCTG TTACAACAAC AATGGGTCCT
GGTGTTAAAG TTGATTCAGC TTCATTCTAA
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| Protein sequence | MAKKSKALRA AIEKIDATKA YSVEEAVALA KETSFAKFDA TVEVAYNLNI DVKKSDQQIR
GAMVLPNGTG KTARVLVFAK GAKAEEATAA GADFVGSDEL VAKINGGWLD FDVVIATPDM
MAVVGRLGRV LGPRNLMPNP KTGTVTMDVT KAVGESKAGK VNYRADKAGN VHVPIGKVSF
DTEKLVENFK ALNTVIAAAK PAASKGAYIT NLSVTTTMGP GVKVDSASF
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