Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2084 |
Symbol | |
ID | 4433689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1974915 |
End bp | 1976189 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639667777 |
Product | tRNA and rRNA cytosine-C5-methylase |
Protein accession | YP_811674 |
Protein GI | 116512767 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.616143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA ATGCAAGACA AACCGCACTC GATGTACTAA ATGATATTTT TGGTAATGAT GCCTATGCAA ATATTTCATT GGATCGAAAT TTGCGAGATT CTGAACTATC CACAGTGGAT AAAGGCTTTG TAACAGCCCT TGTCTACGGT GTAGTTTCTA AAAAAGCTTT ATTAGAGTGG TACATTACTC CTTTATTAAA AAAAGAGCCT AAACCTTGGG CTAAAATGCT TTTATTACTC ACAATTTATC AAGTCCTATT TATGGATAAG GTGCCTACTT CGGCAGCAGT TGATGAAGCT GTAAAAATTG CTAAACGACA TGATGGACAA GCAACAGCTA ATTTTATTAA TGCTGTTTTA AGAAACTTTA TGCGTTCTGA GCACAGAAAT GAAGAACCTA AAGATTGGGA AACTAAATAT TCAATGCCAA AACTGTTATT GGATAAAATG GTTCGCCAAT TCGGTGGGAA AAGAACAGGA GAAATCCTCG AAAGTCTTGA AAAACCAAGT CATGTGAGCT TAAGAAAAAT TGATCCAACT GTAGAAATTG CTGGGACTCG TCCGTCTTTA CTGACAGAAA CAGCATTAAT TGCTGACAGC GGAAATTTTT CAATTATAGA AGAGTTTCAA ACTGGAAGAA TTACGATTCA AGATGAAACA AGTCAATTAG TTGCTCCTCA ACTTGAATTA GAAGGAACAG AAGAAGTTCT TGATGCCTGT GCTGCCCCAG GTGGGAAAAG CACACATATG GCTCAATATT TGACAACTGG TCATATCACG GCATTGGATT TATACGAGCA TAAACTTGAT TTAATTAATC AAAATGCACA ACGTCAGCAT GTTGCGGATA AAATTACCAC TCAAAAAGCT GATGCGACAA TGATTTATGA GAATTTTGGT CCAGAAAAAT TTGATCGAAT TCTAGTCGAT GCTCCATGTT CAGGAATTGG ATTAATTCGC CGTAAACCAG ATATCCGTTA CCGGAAAGAA AGTTCGGATT TCATAGATTT ACAAAAAATT CAATTAGAAA TTCTAAACAG CGCCTCGAAA AGCCTGAAAA AAAGTGGTAT AATGGTGTAC AGTACTTGTA CAATTTTTGA TGAAGAAAAC TTTGACGTTG TTCATGAGTT CCTTGAAAAT CATCCAAATT TTGAACAAGT TGAAATTTCA AATGAAAAAC CAGAAGTGAT TAAAGAGGGC TGTCTTTTCA TTACCCCAGA AATGTATCAT ACGGATGGAT TCTTCATCGC GAAATTTAAA AAAATAGGTG AATAA
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Protein sequence | MTKNARQTAL DVLNDIFGND AYANISLDRN LRDSELSTVD KGFVTALVYG VVSKKALLEW YITPLLKKEP KPWAKMLLLL TIYQVLFMDK VPTSAAVDEA VKIAKRHDGQ ATANFINAVL RNFMRSEHRN EEPKDWETKY SMPKLLLDKM VRQFGGKRTG EILESLEKPS HVSLRKIDPT VEIAGTRPSL LTETALIADS GNFSIIEEFQ TGRITIQDET SQLVAPQLEL EGTEEVLDAC AAPGGKSTHM AQYLTTGHIT ALDLYEHKLD LINQNAQRQH VADKITTQKA DATMIYENFG PEKFDRILVD APCSGIGLIR RKPDIRYRKE SSDFIDLQKI QLEILNSASK SLKKSGIMVY STCTIFDEEN FDVVHEFLEN HPNFEQVEIS NEKPEVIKEG CLFITPEMYH TDGFFIAKFK KIGE
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