| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2069 |
|---|
| Symbol | |
|---|
| ID | 4432827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1961975 |
|---|
| End bp | 1963297 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639667764 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_811661 |
|---|
| Protein GI | 116512754 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AAAAAACTTT TGGCTTAGTC CTCTTTATTA TCTTATTTTC CTATTTTTTA
ATTTTGATGG ATAATTCGAT AATTTTCACA AGTACTGTAA AAACATCTCA GGATTTAAAT
ATGAACGAAG CAAGCCTTTC TTGGGTTTCA AATGCCTATA CCATTACATT TGGAGGTTTT
CTTTTGTTGG CAGGGCGTTT AGGAGATTTA ATGGGTCGAA AAATAATTTT TGTCTCTGGC
CTTTTTATTT TTGGACTATC AAGTTTAGCG GTTGGTTTAT CTACGTCAAC AGAAATGATT
ATAGCAAGAG CAGTTCAAGG AATTGGCTCA GCTATCATTG CGCCAACGAG CTTGGCTTTA
CTGATGGATA GCTATCAGGG AAATTTGCGA ATGAAGGCTA TCTCTTATTA TGGAGCAACC
GCGGGTATTG GTTCAAGTTT TGGTTTAATT CTAGGCGGTT GGCTTACCTC AGCAATTTCA
TGGCGTGTCG GCTTTTTATT GAATGTCCCT TTTAGTTTAT TACTAATTGT TTTAACGCTT
GCGAAAGTTC AACAAAATGA AATCAAGCCA AGTAAAATTG ATTTTCTTGG AAGTTTATTA
TCGGTCATTA TTTCAGTTCT ATTTGTTTAC GGAATTACCA TAAGTAATTT ATTAATTATA
GTTGCTTCTT TAATTTTGAT TTTGGTTTTT CTTTTATGGG AAAAAAGAAT TACTTATGCT
CTCATACCTT TAGAGTTATT TAAGAATCGA AATCGAACAG GTTCTTACAT TGCTCGTTTT
ACTTTTATGA TGGCCATGTT GACTTACTGG TTTATTCTTC CACAAATTAT GCAAAAAATG
TATAACTTTT CACCATTAGA GTCAGGGCTT GCTTTTCTGC CTTTAACACT TGTTAATTTT
ATTGCTGCTC TATTTTTGCC TAAATTAACA AAAGCTTTGG GAAATAGTAA AGTCATGATT
TTAGGACAAG TGATTTTACT GACAGGAATG TTTTTGTCAT TTATATCACA ACCAGAATGG
GGATATTTTT ATGCAATGGC TTTTCAAATG ATGATTATTG GTCTTGGGCA AGGCTGGCTA
CTTGCCCCAC TTACAGCGGC AGGTGTGGCA GGAGTTCCCC CGGAATTATC AGGTGCTGCG
TCAGGCTTAA CAAATATGAT GCATCAACTT GGAGGACCGG TAGGTTTATC AATCGTTGTT
CTATTTAGTT CATCTGTCAT TGATTTAAGT GCTTATTATC ATTTGATAAT GGCTTTCATC
ACAGTATTTT TACTGATAGG ATTTTTAGTT TTAATTTTCA CGAACCCAGT TAATGAAAAA
TAA
|
|---|
| Protein sequence | MKNKKTFGLV LFIILFSYFL ILMDNSIIFT STVKTSQDLN MNEASLSWVS NAYTITFGGF
LLLAGRLGDL MGRKIIFVSG LFIFGLSSLA VGLSTSTEMI IARAVQGIGS AIIAPTSLAL
LMDSYQGNLR MKAISYYGAT AGIGSSFGLI LGGWLTSAIS WRVGFLLNVP FSLLLIVLTL
AKVQQNEIKP SKIDFLGSLL SVIISVLFVY GITISNLLII VASLILILVF LLWEKRITYA
LIPLELFKNR NRTGSYIARF TFMMAMLTYW FILPQIMQKM YNFSPLESGL AFLPLTLVNF
IAALFLPKLT KALGNSKVMI LGQVILLTGM FLSFISQPEW GYFYAMAFQM MIIGLGQGWL
LAPLTAAGVA GVPPELSGAA SGLTNMMHQL GGPVGLSIVV LFSSSVIDLS AYYHLIMAFI
TVFLLIGFLV LIFTNPVNEK
|
|---|
| |