Gene LACR_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2000 
Symbol 
ID4432863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1896185 
End bp1897522 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content37% 
IMG OID639667698 
Producthemolysin-like protein 
Protein accessionYP_811595 
Protein GI116512688 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0678745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACC CTGATCCCGA GAGTGTATCG ATACTCTTGC AGATTCTTTT ACTAATTTTT 
TTAACAGCTT TAAATGCCTT CTTCTCAGCC AGTGAGATGG CCATGGTCAG TCTCAGCCGG
ACAAAAGTAG AGCAAAAGGC CAGCGAAGGT GATAAGAAAT ATATCAACCT TGTTAATATT
CTTAATCAAC CAAGTAATTT CCTCTCGACA ATTCAGATTG GGATTACTCT GATTAACATC
TTAGCGGGGG CTAGTTTGGC CGAAGCTTTG TCATCTCGCC TAGCACCATT ATTAGGTGGA
ACGGCACTGG CTAAAACTTT ATCTCAAATT ATTGTTTTAG CTATTTTGAC TTATGTTTCA
CTCGTATTTG GTGAACTTTA TCCTAAACGA ATTGCCCAAA ACCTCAAAGA AAAAATGGCC
CTACGGGTCG CACCACCAAT CCAATTTTTA GGAAAAGTGA TGAAACCTTT TGTTTGGTTT
TTAGCAAGTT CAACCAACGT TTTGAGTCGT TTGACACCAA TGAAATTTGA TGATTTGGAT
GAAAGTATGA CTCGTGATGA AATTGAGTAT TTACTTAATA CCAATGATGA AGCACTTGAT
GATAATGAAC GTGAGATGAT TACTGGTGTA TTCAGTTTGG ATGAATTGGT GGCGCGTGAA
ATTATGGTTC CAAGAACTGA CGCCTTCATG ATCGATATTA ATGACGACTC ACGTGAAAAT
ATTACAGCTA TTCTGAACGA AACTTATTCA CGAGTTCCAG TTTATGATGA TGACAAAGAT
AATATTCTAG GGATTCTACA TGTCAAAAAA CTTTTGAGAT ATAGTTTTGA GCATGGTTTT
GATGATATTG ACCTACGGGA AATTCTTCAA GAACCATTGT TTGTCCCTGA AACAATCTTC
GTTGACGATT TGATGCGTCA AATGCGCAAA ACCCAAAATC AAATGGCAGT ATTGCTAAAT
GAATATGGTG GCGTTGAAGG TGTAGTAACA TTGGAAGATT TACTAGAAGA AATCGTCGGT
GAAATTGATG ACGAAACAGA TATTGCCGAA GAAGAAGTTT TCAAAATTGG CGAAAACCTC
TATGTCGTGC AAGGGAAAAT GACTCTAAAC GACTTCAATG AAGAATTTGA TACTCATCTT
GAAAGTAATG ACGTAGATAC CATTGCGGGT TACTTCTTGG CAACGACTGG GAAAATTCCG
GCCAAAGGAC AACAAATTGT TTGCAAAGTT GATAATGAGG AAGATCATTT TTCACTGACA
AGTTTAGAAG TTTCTGGAAA ACGTGTGGTT AAACTTCGTG TTGAATTTGA CGTTGAACCA
GAAGAAACAG AAATTTAA
 
Protein sequence
MSNPDPESVS ILLQILLLIF LTALNAFFSA SEMAMVSLSR TKVEQKASEG DKKYINLVNI 
LNQPSNFLST IQIGITLINI LAGASLAEAL SSRLAPLLGG TALAKTLSQI IVLAILTYVS
LVFGELYPKR IAQNLKEKMA LRVAPPIQFL GKVMKPFVWF LASSTNVLSR LTPMKFDDLD
ESMTRDEIEY LLNTNDEALD DNEREMITGV FSLDELVARE IMVPRTDAFM IDINDDSREN
ITAILNETYS RVPVYDDDKD NILGILHVKK LLRYSFEHGF DDIDLREILQ EPLFVPETIF
VDDLMRQMRK TQNQMAVLLN EYGGVEGVVT LEDLLEEIVG EIDDETDIAE EEVFKIGENL
YVVQGKMTLN DFNEEFDTHL ESNDVDTIAG YFLATTGKIP AKGQQIVCKV DNEEDHFSLT
SLEVSGKRVV KLRVEFDVEP EETEI