Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2000 |
Symbol | |
ID | 4432863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1896185 |
End bp | 1897522 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639667698 |
Product | hemolysin-like protein |
Protein accession | YP_811595 |
Protein GI | 116512688 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0678745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACC CTGATCCCGA GAGTGTATCG ATACTCTTGC AGATTCTTTT ACTAATTTTT TTAACAGCTT TAAATGCCTT CTTCTCAGCC AGTGAGATGG CCATGGTCAG TCTCAGCCGG ACAAAAGTAG AGCAAAAGGC CAGCGAAGGT GATAAGAAAT ATATCAACCT TGTTAATATT CTTAATCAAC CAAGTAATTT CCTCTCGACA ATTCAGATTG GGATTACTCT GATTAACATC TTAGCGGGGG CTAGTTTGGC CGAAGCTTTG TCATCTCGCC TAGCACCATT ATTAGGTGGA ACGGCACTGG CTAAAACTTT ATCTCAAATT ATTGTTTTAG CTATTTTGAC TTATGTTTCA CTCGTATTTG GTGAACTTTA TCCTAAACGA ATTGCCCAAA ACCTCAAAGA AAAAATGGCC CTACGGGTCG CACCACCAAT CCAATTTTTA GGAAAAGTGA TGAAACCTTT TGTTTGGTTT TTAGCAAGTT CAACCAACGT TTTGAGTCGT TTGACACCAA TGAAATTTGA TGATTTGGAT GAAAGTATGA CTCGTGATGA AATTGAGTAT TTACTTAATA CCAATGATGA AGCACTTGAT GATAATGAAC GTGAGATGAT TACTGGTGTA TTCAGTTTGG ATGAATTGGT GGCGCGTGAA ATTATGGTTC CAAGAACTGA CGCCTTCATG ATCGATATTA ATGACGACTC ACGTGAAAAT ATTACAGCTA TTCTGAACGA AACTTATTCA CGAGTTCCAG TTTATGATGA TGACAAAGAT AATATTCTAG GGATTCTACA TGTCAAAAAA CTTTTGAGAT ATAGTTTTGA GCATGGTTTT GATGATATTG ACCTACGGGA AATTCTTCAA GAACCATTGT TTGTCCCTGA AACAATCTTC GTTGACGATT TGATGCGTCA AATGCGCAAA ACCCAAAATC AAATGGCAGT ATTGCTAAAT GAATATGGTG GCGTTGAAGG TGTAGTAACA TTGGAAGATT TACTAGAAGA AATCGTCGGT GAAATTGATG ACGAAACAGA TATTGCCGAA GAAGAAGTTT TCAAAATTGG CGAAAACCTC TATGTCGTGC AAGGGAAAAT GACTCTAAAC GACTTCAATG AAGAATTTGA TACTCATCTT GAAAGTAATG ACGTAGATAC CATTGCGGGT TACTTCTTGG CAACGACTGG GAAAATTCCG GCCAAAGGAC AACAAATTGT TTGCAAAGTT GATAATGAGG AAGATCATTT TTCACTGACA AGTTTAGAAG TTTCTGGAAA ACGTGTGGTT AAACTTCGTG TTGAATTTGA CGTTGAACCA GAAGAAACAG AAATTTAA
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Protein sequence | MSNPDPESVS ILLQILLLIF LTALNAFFSA SEMAMVSLSR TKVEQKASEG DKKYINLVNI LNQPSNFLST IQIGITLINI LAGASLAEAL SSRLAPLLGG TALAKTLSQI IVLAILTYVS LVFGELYPKR IAQNLKEKMA LRVAPPIQFL GKVMKPFVWF LASSTNVLSR LTPMKFDDLD ESMTRDEIEY LLNTNDEALD DNEREMITGV FSLDELVARE IMVPRTDAFM IDINDDSREN ITAILNETYS RVPVYDDDKD NILGILHVKK LLRYSFEHGF DDIDLREILQ EPLFVPETIF VDDLMRQMRK TQNQMAVLLN EYGGVEGVVT LEDLLEEIVG EIDDETDIAE EEVFKIGENL YVVQGKMTLN DFNEEFDTHL ESNDVDTIAG YFLATTGKIP AKGQQIVCKV DNEEDHFSLT SLEVSGKRVV KLRVEFDVEP EETEI
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