| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1981 |
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| Symbol | rpoB |
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| ID | 4432639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1872498 |
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| End bp | 1876088 |
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| Gene Length | 3591 bp |
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| Protein Length | 1196 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639667679 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_811576 |
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| Protein GI | 116512669 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGGAC ATGACATAAA ATACGGTAAA CACCGTACAA GACGCAGTTT TTCACGTATT
AAAGAAGTAA TCGGTTTGCC AAACCTCATC GAAGTTCAAA CATTAAGTTA TAAAAACTTC
CTCGATGAAG GTCTTGCAAA TGTCTTCAAA GAAATGTTTC CAATCGACAA CTTTGCGGGT
ACAATGGAAC TCGAATTTGT TGGTTATGAA ATGAAAACCC CAAAATACAC TGTTGAAGAA
GCTCGCGCAC ATGACGCAAA CTATTCAGCA CCTATCTATG TAACCTTCCG TCTTGTAAAT
AAAGAAACTG GTGAATTAAA AACACAAGAA GTCTTCTTTG GTGACTTCCC ACTCATGACT
GAAATGGGGA CATTTATCAA TAATGGTTCA GAACGTTTGA TCGTCAGTCA GTTGGTACGT
AGTCCAGGTT CATATTTCCA CCTTAAAACG GATAAAAATG GTCTTGAAAG TTTTGGACAT
ACCACAATTC CTAACCGTGG AGCTTGGTTT GAGTTGGATA CAGATGCTAA AGGCATTGGT
TATGTTCGTA TTGATCGTAC TCGTAAATTA ACTTTCACAA CAATGCTTCG TGCGCTTGGA
TTTGGTTCAG ATGACGAAAT CCTTGAATTG TTGGGTGAAA CTCAACTTTT GACAGACACA
ATTGCAAAAG ATGTTCATAA AAATCCAGCT GACACTCGTG TAGAAGAAGC CCTCAAAGAC
ATCTATGACC GCTTGCGTCC AGGAGAACCA AAAACAGCAG ACAGCTCACG TGGCTTACTT
GTTGCGCGTT TCTTCGATCC AAAACGTTAT GATTTTGCTC CTGTTGGACG TTATAAATTT
AACAAAAAAC TAGCTCTTAA AAATCGTTTG CTTGGTTTGA CTTTGGCTGA GCCAATTGTT
GATCCAGAAA CTGGCGAAAT TCTTGTTAAT ACAGATACAC TTGTGACTCG TGACGTGCTC
GATTTAATCG AACCATTGCT TGATAATGGT CTTGGAAACT TCGTTGTTGA ACCTTCTGAC
GATGCAGTAA TTCCAGAACC AATCACTTTG CAAAGTATTA AAGTTTATTC TCCTAAAGAT
TCAGAACGTG TTGTGACATT GCTCTCAAAT GGTAATCCAG ATTCAGAATG TCGTGTCTTG
ACACCAGCCG ATGTTATTTC AAACATCAGC TACTGGCTTG GACTTGCTGA AGGAATTGGT
AAAGTAGACG ATATTGACCA CTTAGGTAAC CGTCGTATTC GTTCAGTTGG TGAATTACTT
CAAAACCAAG TACGTATCGG ACTTTCACGT ATGGAACGTG TCATTCGTGA ACGTATGTCA
TCTTCAGAAA ACGAAAATAT CACACCGCAA GGTTTGATTA ACATTCGTCC TGTAACAGCT
TCAATCAAAG AATTCTTTGG TTCATCACAG TTGTCACAAT TTATGGACCA ACATAATCCT
TTGTCTGAGC TTTCACACAA ACGTCGTTTC TCTGCCTTAG GACCTGGTGG TATCTCTCGT
GACCGTGCTT CATATGAAGT GCGTGACGTT CACTACACTC ACTATGGCCG TATGTGTCCT
ATTGAAACAC CTGAAGGACC AAACATCGGT TTGATTAACA ACTTGTCATC ATATGCCAAA
GTTAATGAAT ATGGTTTCAT CATGTCACCA TATCGTCGTG TTGACCGTGT GAATGGAATT
GTTACTGACG AAGTTGAATA TTTGACTGCC GATGAAGAAG ATAACTACAC TGTAGCCCAA
GCGAACTCAC CATTGACTGA TGACAGTCGT TTTGCTAACG AAACAGTTAT GGCTCGTCAT
ACAGGTAACA ATATTGAAGT TGAAGCTTCA ACAGCTGACT ATATGGATGT TTCACCTAAA
CAGGTTATCG CCGTCGCTGC TGCTTGTATT CCTTTCTTGG AAAACGATGA CTCCAACCGT
GCCCTCATGG GTGCCAACAT GCAACGTCAA GCAGTTCCAT TGATTGACCC ACATGCACCT
TGGATTGGTA CTGGTATGGA ACATCAAACC GCTCGCGACT CAGGAGCTGC CCTTCTTGCT
AAGCATGCAG GTGTAGTTGA ATATGTTGAC GGTAATGAAA TCCGTGTTCG CCGTACATCT
GGTGAACTTG ATATTTACAA TATTACAAAA TATCGTCGTT CTAACTCAGG AACTTCTTAT
AATCAACGTC CATTGGCTCG TCTTGGCGAA AAAGTTGAAA AAAACGACAT CATCGCTGAC
GGTCCATCTA TGGAAAATGG AGAAATGGCC CTTGGTCAAA ATCCACTCGT TGCCTATATG
ACTTGGGAAG GTTATAACTT CGAGGATGCC GTAATCATGT CTGAACGTTT GATTAAAGAT
GACGTTTATA CATCAATCGC AATCGAAGAA TATGAATCAG AGACTCGCGA TACAAAACTT
GGCCCTGAAG AAATTACACG CGAAATTCCA AACGTCGGGG ATGAAGCACT CAAAAACCTT
GATGAATCTG GAATTATCCG TATTGGTGCC GAAGTTAAAG ATGGTGATTT GCTTGTTGGT
AAAGTAACAC CTAAGGGTGA AACTGACCCA ACACCAGAAG AACGTTTGCT TCGTGCAATC
TTCGGTGAAA AAGCTCGTGA AGTTCGTGAT ACTTCACTTC GTGTTCCTCA CGGTGGAGGC
GGTATCGTTC ATGACGTTCG CGTATTTACC CGTGAAAATG GTGATGAATT ACCATCAGGT
GTGAATAAAC TCGTTCGTGT CTTCATTGCT CAAAAACGTA AGATTCACGT TGGGGATAAA
ATGGCCGGTC GTCACGGTAA CAAAGGGGTT GTTTCAAATA TCGTTCCCGT GGAAGATATG
CCTTACTTAC CAGATGGAAC ACCGATTGAT ATCATGTTGA ACCCACTTGG GGTACCATCA
CGGATGAATA TTGGACAAGT TATGGAGCTC CATTTAGGTA TGGCTGCTCG TACACTTGGT
ATTCACATTG CGACACCAGT GTTTGATGGA GCCTCTGATG AAGATATCTG GGATACTGTT
AAAGAAGCTG GTATGGCTGC TGATGCGAAA ACAGTTCTCT ATGACGGACG TACTGGTGAA
CCATTTGATA ACCGAATTTC AGTCGGTGTC ATGTACATGA TTAAACTTCA CCACATGGTT
GATGATAAAC TCCATGCACG TTCAGTTGGT CCTTACTCAC TCGTTACACA ACAACCGCTC
GGTGGTAAAG CACAGTTCGG TGGACAACGT TTCGGGGAAA TGGAAGTTTG GGCGCTTGAA
GCTTATGGTG CTGCCAATGT TCTTCAAGAA ATCTTAACTT ACAAATCAGA TGACGTAATT
GGACGTACGC GCGCCTATGA AGCTATCGTT AAGGGTGAAC GTATTCCTAA ACCAGGTCTT
CCTGAATCAT TCCGCGTATT GGTTAAAGAA TTACAATCAC TTGGTCTTGA TATGAAAGTC
TTCGATGCTG ATCGTAATGT TCTTGACTTG CGTGAATTGG ATGAAGATGA AGTAATGACT
CGTCCAGATA ATACAGAAAT TACTCCGGAA ATGCTTGAAG CACAAGAAGC AATTGTTGCA
CAAGCAGAAG CTGAAGAAGA AGCTTTGATT AACGCTGATA TTGAAAAATA A
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| Protein sequence | MAGHDIKYGK HRTRRSFSRI KEVIGLPNLI EVQTLSYKNF LDEGLANVFK EMFPIDNFAG
TMELEFVGYE MKTPKYTVEE ARAHDANYSA PIYVTFRLVN KETGELKTQE VFFGDFPLMT
EMGTFINNGS ERLIVSQLVR SPGSYFHLKT DKNGLESFGH TTIPNRGAWF ELDTDAKGIG
YVRIDRTRKL TFTTMLRALG FGSDDEILEL LGETQLLTDT IAKDVHKNPA DTRVEEALKD
IYDRLRPGEP KTADSSRGLL VARFFDPKRY DFAPVGRYKF NKKLALKNRL LGLTLAEPIV
DPETGEILVN TDTLVTRDVL DLIEPLLDNG LGNFVVEPSD DAVIPEPITL QSIKVYSPKD
SERVVTLLSN GNPDSECRVL TPADVISNIS YWLGLAEGIG KVDDIDHLGN RRIRSVGELL
QNQVRIGLSR MERVIRERMS SSENENITPQ GLINIRPVTA SIKEFFGSSQ LSQFMDQHNP
LSELSHKRRF SALGPGGISR DRASYEVRDV HYTHYGRMCP IETPEGPNIG LINNLSSYAK
VNEYGFIMSP YRRVDRVNGI VTDEVEYLTA DEEDNYTVAQ ANSPLTDDSR FANETVMARH
TGNNIEVEAS TADYMDVSPK QVIAVAAACI PFLENDDSNR ALMGANMQRQ AVPLIDPHAP
WIGTGMEHQT ARDSGAALLA KHAGVVEYVD GNEIRVRRTS GELDIYNITK YRRSNSGTSY
NQRPLARLGE KVEKNDIIAD GPSMENGEMA LGQNPLVAYM TWEGYNFEDA VIMSERLIKD
DVYTSIAIEE YESETRDTKL GPEEITREIP NVGDEALKNL DESGIIRIGA EVKDGDLLVG
KVTPKGETDP TPEERLLRAI FGEKAREVRD TSLRVPHGGG GIVHDVRVFT RENGDELPSG
VNKLVRVFIA QKRKIHVGDK MAGRHGNKGV VSNIVPVEDM PYLPDGTPID IMLNPLGVPS
RMNIGQVMEL HLGMAARTLG IHIATPVFDG ASDEDIWDTV KEAGMAADAK TVLYDGRTGE
PFDNRISVGV MYMIKLHHMV DDKLHARSVG PYSLVTQQPL GGKAQFGGQR FGEMEVWALE
AYGAANVLQE ILTYKSDDVI GRTRAYEAIV KGERIPKPGL PESFRVLVKE LQSLGLDMKV
FDADRNVLDL RELDEDEVMT RPDNTEITPE MLEAQEAIVA QAEAEEEALI NADIEK
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