Gene LACR_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1952 
Symbol 
ID4432948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1843869 
End bp1844840 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content34% 
IMG OID639667651 
Productbiotin operon repressor 
Protein accessionYP_811548 
Protein GI116512641 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.248115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAA CAAAACAATT TGTCTTGTTA GAACTTCTTC GGCAAAAAGG AAATTGGGTT 
TCAGGAGATG AATTAGCAGA AGAGCTAAAT ATTAGTCGTG AAAGTATTTG GAAAGCAATC
AATACTTTAA AACGTAAAGG AAATCAGATT GTCAGCCGAA AAAATTTAGG ATATAAGTAT
ATTGGCAATG AATCATTAGA CGAAGATACG ATAAATTTTT ATAGTGGAAT GAAATTTGAA
AATGATATTT TCGTTTTTGA TGAAGTGACT TCTACACAGG AAGTGGCAAA ACAATATTTG
ACGACTCATG AGGTCAAACA GCCGCTTGTT TTTGTTGCGA ATAATCAATC TCAAGGACAT
GGGAGGCGCG GTCGAAAATT TTATTCGCCA AGTGATACTG GACTATATTT TAGTCTTATT
TTACCTAATC CCAGCCATGA TATTTTGAAA ATAGGTTTAT TGACTACAAG TACTGCTGTT
GCCGTGGTCA AAGTACTTGA AAAATTTTAT GAGGATAAAA ACTTTAAGTT AAAGTGGGTT
AATGATATTT ATCTAGATAC TTATAAAGTG GGAGGTATTA TCACAGAAGC GGATTTAGAT
TTAGAATCGA GTTCTGCTAG CAATTTTATT ATGGGAATTG GCTTAAATTT GGCAACTAAG
GAATTTCCAG ATGAGTTATT AGGAAAAGTG AAAGGAATTA ATCCCAATAT AAATATAGAC
CGGAATCAAT TGATTGCAGA AATGGCTCAG GAAGTAATTG CTAATTTTTC AAATTATACT
CACCCGAACT TGATTGAAGA ATATCGCAAG CGCTCTTTAT TAGTCGGAAA AGAGGTTACT
TTGAAATTAG GAACGAGTTC TGTCAAAGGA GAAGTACAAG GAATTGCTGA TGACGGAAGT
TTAGTACTCA AAGGGGATTC AGGAAAGCTA CAATCTTTCA CGAGTGGTGA GGTTATAAAA
GTTGATTGGT AA
 
Protein sequence
MQTTKQFVLL ELLRQKGNWV SGDELAEELN ISRESIWKAI NTLKRKGNQI VSRKNLGYKY 
IGNESLDEDT INFYSGMKFE NDIFVFDEVT STQEVAKQYL TTHEVKQPLV FVANNQSQGH
GRRGRKFYSP SDTGLYFSLI LPNPSHDILK IGLLTTSTAV AVVKVLEKFY EDKNFKLKWV
NDIYLDTYKV GGIITEADLD LESSSASNFI MGIGLNLATK EFPDELLGKV KGINPNINID
RNQLIAEMAQ EVIANFSNYT HPNLIEEYRK RSLLVGKEVT LKLGTSSVKG EVQGIADDGS
LVLKGDSGKL QSFTSGEVIK VDW