Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1952 |
Symbol | |
ID | 4432948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1843869 |
End bp | 1844840 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639667651 |
Product | biotin operon repressor |
Protein accession | YP_811548 |
Protein GI | 116512641 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.248115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAA CAAAACAATT TGTCTTGTTA GAACTTCTTC GGCAAAAAGG AAATTGGGTT TCAGGAGATG AATTAGCAGA AGAGCTAAAT ATTAGTCGTG AAAGTATTTG GAAAGCAATC AATACTTTAA AACGTAAAGG AAATCAGATT GTCAGCCGAA AAAATTTAGG ATATAAGTAT ATTGGCAATG AATCATTAGA CGAAGATACG ATAAATTTTT ATAGTGGAAT GAAATTTGAA AATGATATTT TCGTTTTTGA TGAAGTGACT TCTACACAGG AAGTGGCAAA ACAATATTTG ACGACTCATG AGGTCAAACA GCCGCTTGTT TTTGTTGCGA ATAATCAATC TCAAGGACAT GGGAGGCGCG GTCGAAAATT TTATTCGCCA AGTGATACTG GACTATATTT TAGTCTTATT TTACCTAATC CCAGCCATGA TATTTTGAAA ATAGGTTTAT TGACTACAAG TACTGCTGTT GCCGTGGTCA AAGTACTTGA AAAATTTTAT GAGGATAAAA ACTTTAAGTT AAAGTGGGTT AATGATATTT ATCTAGATAC TTATAAAGTG GGAGGTATTA TCACAGAAGC GGATTTAGAT TTAGAATCGA GTTCTGCTAG CAATTTTATT ATGGGAATTG GCTTAAATTT GGCAACTAAG GAATTTCCAG ATGAGTTATT AGGAAAAGTG AAAGGAATTA ATCCCAATAT AAATATAGAC CGGAATCAAT TGATTGCAGA AATGGCTCAG GAAGTAATTG CTAATTTTTC AAATTATACT CACCCGAACT TGATTGAAGA ATATCGCAAG CGCTCTTTAT TAGTCGGAAA AGAGGTTACT TTGAAATTAG GAACGAGTTC TGTCAAAGGA GAAGTACAAG GAATTGCTGA TGACGGAAGT TTAGTACTCA AAGGGGATTC AGGAAAGCTA CAATCTTTCA CGAGTGGTGA GGTTATAAAA GTTGATTGGT AA
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Protein sequence | MQTTKQFVLL ELLRQKGNWV SGDELAEELN ISRESIWKAI NTLKRKGNQI VSRKNLGYKY IGNESLDEDT INFYSGMKFE NDIFVFDEVT STQEVAKQYL TTHEVKQPLV FVANNQSQGH GRRGRKFYSP SDTGLYFSLI LPNPSHDILK IGLLTTSTAV AVVKVLEKFY EDKNFKLKWV NDIYLDTYKV GGIITEADLD LESSSASNFI MGIGLNLATK EFPDELLGKV KGINPNINID RNQLIAEMAQ EVIANFSNYT HPNLIEEYRK RSLLVGKEVT LKLGTSSVKG EVQGIADDGS LVLKGDSGKL QSFTSGEVIK VDW
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