Gene LACR_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1864 
Symbol 
ID4433493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1761935 
End bp1762747 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content47% 
IMG OID639667567 
Productmannose-specific PTS system component IIC 
Protein accessionYP_811464 
Protein GI116512557 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00046638 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACG GTGTTTTATC TGTAATCTTG GTCATTCTCG TTGCCTTCCT TGCTGGTCTT 
GAAGGTATCC TTGACCAATG GCAATTCCAC CAACCAATTA TCGCCTGCTC GCTCATCGGT
ATTGTTACTG GTCACGCATC TGCAGGGATT ATCCTCGGTG GTTCGCTTCA ATTGATCGCT
CTTGGTTGGG CTAACGTTGG TGCCGCTGTC GCACCCGATG CTGCCCTTGC CTCAATCGCC
TCATCTATTT TGATGGTTCA ATCAAACACC TTTGATTTGA CTCACATCAT GGGTACTATC
GTTCCTGCTG CTATCTTGCT TGCAACTGCT GGTCTTGTAT TGACTACTCT TGTACGTATG
CTTTCAGTTG TGCTCGTTCA CCAAGCTGAC CGTGCTGCGG AAAATGGTTC TTACTCAGGT
GTTGAAATGT GGCACTTCAT CGCGCTTATT TGTCAAGGTT TGCGTATCGC TATCCCTGCT
GGACTTCTTT TGGTTATCTC ACCTGAAGCT ATCCAAAACG CACTTGCTGC TATTCCTCCA
GTTATCTCTG GTGGTCTTGC TGTCGGTGGT GGGATGGTTG TTGCCGTTGG TTATGCAATG
GTTATCAACC TTATGGCTAC TCGTGAAGTA TGGCCTTTCT TCTTCCTTGG TTTCGCTCTC
GCACCAATCT CTGAATTAAC ATTGATTGCA ACTGGTGTCC TCGGTGTTGT TATCGCTATC
GTTTACCTTA ACCTTCAATC TTCTGGTGGT TCTGGAAATG GTACTGCATC ATCATCAGGT
GACCCAATTG GCGACATCTT GAACGACTAC TAA
 
Protein sequence
MEYGVLSVIL VILVAFLAGL EGILDQWQFH QPIIACSLIG IVTGHASAGI ILGGSLQLIA 
LGWANVGAAV APDAALASIA SSILMVQSNT FDLTHIMGTI VPAAILLATA GLVLTTLVRM
LSVVLVHQAD RAAENGSYSG VEMWHFIALI CQGLRIAIPA GLLLVISPEA IQNALAAIPP
VISGGLAVGG GMVVAVGYAM VINLMATREV WPFFFLGFAL APISELTLIA TGVLGVVIAI
VYLNLQSSGG SGNGTASSSG DPIGDILNDY