Gene LACR_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1863 
Symbol 
ID4433492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp1760867 
End bp1761856 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content43% 
IMG OID639667566 
Productphosphotransferase system, mannose/fructose-specific component IIA 
Protein accessionYP_811463 
Protein GI116512556 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00596376 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTATCG GAATTGTTAT TGCGAGCCAT GGTGAATTCG CTGCAGGCAT CAAACAATCT 
GGTTCTATGA TTTTCGGAGA GCAAGAAAAA GTACAAGTTG TTACTTTTAT GCCTAGCGAA 
GGACCAACTG ATTTGCATGC TAAAATTGAA GATGCCATCG CAACATTTGA TGCTGAAGAT 
GAAGTACTTG TCCTTGCTGA CTTATGGAGC GGTTCTCCAT TTAACCAAGC AAGTGCAGTG 
ATGGGTGAAA ATCCAGAGCG CAAGATCGCT ATCATCACAG GCCTCAACCT GCCTATGCTT 
ATCCAAGCCT ACACAGAACG CATGATGGAC GCGTCTGCTG GAGTGGATAA AGTCGTAGCA 
AATATTATGA AAGAAGCCAA AGGCGGTATT AAAGTACTTC CTGAAGAACT TCAACCTGCT 
GAAGAAACTG CTGTTGCAGC TGCTCCGGCT GCTGTTCAAG GTGCAATCCC AGAAGGAACA 
GTCATCGGTG ATGGTAAAAT TAAAATTAAC CTCGCTCGTA TTGACTCACG TTTGCTTCAC 
GGACAAGTTG CAACTGCTTG GACTCCAGAC TCAAGAGCAA ACCGCATCAT CGTTGTTTCT 
GACACCGTTT CTAAAGATGA ACTTCGTAAG AAACTCATCG AACAAGCGGC CCCAACTGGT 
GTAAAAGCTA ACGTTATACC AATCAAGAAA ATGATCGAAG TTGCTAAAGA CCCCCGCTTT 
GGTGACACTA AAGCACTTCT TCTTTTCGAA ACTCCACAAG ATGCTCTTGC AACAATCGAA 
GGTGGTGTAC CAATTGATAC ATTGAACGTT GGTTCTATGG CTCACTCAAC TGGTAAAACA 
ATGCTCAACA AAGTTCTTTC TATGGACAAA GATGACGTTG CTACTTTTGA AAAATTGCGT 
GACCTCGGAG TTAAATTCGA CGTACGTAAA GTTCCGGCTG ATTCTAAATC AGACCTCTTT 
GGTTTGATTA AAAAAGCTAA CGTACAATAA
 
Protein sequence
MSIGIVIASH GEFAAGIKQS GSMIFGEQEK VQVVTFMPSE GPTDLHAKIE DAIATFDAED 
EVLVLADLWS GSPFNQASAV MGENPERKIA IITGLNLPML IQAYTERMMD ASAGVDKVVA 
NIMKEAKGGI KVLPEELQPA EETAVAAAPA AVQGAIPEGT VIGDGKIKIN LARIDSRLLH 
GQVATAWTPD SRANRIIVVS DTVSKDELRK KLIEQAAPTG VKANVIPIKK MIEVAKDPRF 
GDTKALLLFE TPQDALATIE GGVPIDTLNV GSMAHSTGKT MLNKVLSMDK DDVATFEKLR 
DLGVKFDVRK VPADSKSDLF GLIKKANVQ