| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1633 |
|---|
| Symbol | |
|---|
| ID | 4434112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1544085 |
|---|
| End bp | 1545245 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 639667342 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_809552 |
|---|
| Protein GI | 116512336 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA TAGAACAGCT CATGATAGAT TCAGCAGATT TAATGTCAGA TTTTATTCAA
TTGACAATTT TTATATTCCG CAAGGAGGAT TTTCAACTTT TTTATAGGAG TGATGAAGAA
GAGCAAGCTT TTTCAAAAGA AATTATCGCT CATTTATCTC AGTTGCCCTT GAAGGAAGAG
GTGAATTTAT TTTATATGCC TAAGATAAAA GGATATATTA CTTATTTTTC TGTATTTGGT
AAAGAGGAGT ATCTTCTACT TATTTTTAAA GGACAAGAAA AACTTGCAAA TAATCCTTTC
CCCGTTGAAG TAAAACAATT ATTAAAAAGT GGTATTTTAC TCTATCAAAT GATTTTTCAA
GAAAAATTAG ATTATGAAGA ATTATTTGAG AAAAATCAGC ATATTATTTC TCCATTGCTT
GCTGCTAAAC CAATTGAAAT GGAAATGATT CCAATACGTG AGGAAAGTAA ATTCCATAAA
ACATATCTTT CTGAAAAATA TTTGGGGGAA TGTGTTATTC GTGGAGATGT TGCAGAGTTA
AAAAAAGCTT TTTCAAATTA TATGAATAAA GGAACTGCTG GAAAATTATC TAATAATTCA
ATGCGACATA AGAAAAACAT TTTGATTTCA GTCATCACTA TGACTACTCG TTCGGCTATA
CAGGGAGGAT TACCTGAAGA AGAAGCTTTT TTGATGAGTG ATTTATATAT TCAAGAGCTT
GAAGAATTAA CGGAATTAGA AGAAATTAGA ACGCTTGCCT ATAATGTGAT GATCGATTTT
GCAGATAAAG TGAAACAGCA TCGATATTGT CAGGTTTCTT ATAAAATATT ATCTTGTCAA
AAGTATATTG TTAATCATTT ATACGAAAAA CTAAGTGTGA GTGAAATTGC AGAAGAGCTA
CACATGAATA TTTCTTATTT ATCTTCACAA TTCAAAAAAG AGACAGGGCA AACAATTACA
AACTTTATTC AGGAGAAGCG AATAGAAGAA GCTAGAGAAT TAATCCTTTT CTCAGACTAT
CCTTTTTCAA GAATTTATAC CTTGTTAAAT TTTACTGACC AAAGTCATTT TATAAAAATA
TTTAAAAAAT ATACTGGAAT AACTCCCAAA AAGTTTCAAG ATCAGTATAT TTATCATGCC
TCTACATCAA GATATGATTG A
|
|---|
| Protein sequence | MKTIEQLMID SADLMSDFIQ LTIFIFRKED FQLFYRSDEE EQAFSKEIIA HLSQLPLKEE
VNLFYMPKIK GYITYFSVFG KEEYLLLIFK GQEKLANNPF PVEVKQLLKS GILLYQMIFQ
EKLDYEELFE KNQHIISPLL AAKPIEMEMI PIREESKFHK TYLSEKYLGE CVIRGDVAEL
KKAFSNYMNK GTAGKLSNNS MRHKKNILIS VITMTTRSAI QGGLPEEEAF LMSDLYIQEL
EELTELEEIR TLAYNVMIDF ADKVKQHRYC QVSYKILSCQ KYIVNHLYEK LSVSEIAEEL
HMNISYLSSQ FKKETGQTIT NFIQEKRIEE ARELILFSDY PFSRIYTLLN FTDQSHFIKI
FKKYTGITPK KFQDQYIYHA STSRYD
|
|---|
| |